Gene Tpau_1653 details

Gene Information

• Locus tag: Tpau_1653
• ID: 9155803
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1726320
• End bp: 1727012
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 65%
• Product: binding-protein-dependent transport systems inner membrane component
• Protein accession: YP_003646613
• Protein GI: 296139370

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGCA ACTACGTGAC CTTCCTCGAC GACGTCTTCC CTCCCGGCAC GAAGGAGGTC 
TTCGTCGATG CGATCTTCGA GACCATCCGC CTGGTCGGCA TCACCATGGT CGTCGGCGGC 
CTGCTCGGCC TGGTGTACGG CACCCTGCTG TACGCCACGC GCCCCGGCAA CCTGCTGGAG 
AACAAGTTCG TCTTCGGCGT GCTCAACGTG CTGGTGAACA TCATCCGGCC GATTCCGTTC 
ATCATCTTCA TCACGGCCAT CGCGCCGATC ACGAAGGCGG TGATCGGCAC TCGGATCGGT 
GTCGAGGCGG CGGCGTTCGC GATGACGGTG ATGGCCACCT TCGTGATCGG CCGCGTCGTG 
GAGCAGAACC TGGTGACGGT GGATCCCGGT GTGGTGGAGG CCGCACGGTC GATGGGCGCC 
AGCAAGTGGC GCACCCTGGC GACGGTGGTG ATCCCCGAGG GGCTCGCACC GCTGGCGCTG 
GGATACACGT TCATGTTCGT CGCTGTGGTC GACATGTCGG CCATGGCCGG CTACGTCGGT 
GGCGGCGGTC TGGGCGATTT CGCCCGCCAG TACGGCTATC AGCAGGCCAA CTGGCAGCTG 
ACCCTCGTGG TGATCGTGGT GCTGATCGTG GTGGTGCAGG TCGTCCAGTT CTTCGGTAAT 
TGGCTCAGCC GCCGCCTACA GCACCGCGGC TGA 

 

Protein sequence

MTGNYVTFLD DVFPPGTKEV FVDAIFETIR LVGITMVVGG LLGLVYGTLL YATRPGNLLE 
NKFVFGVLNV LVNIIRPIPF IIFITAIAPI TKAVIGTRIG VEAAAFAMTV MATFVIGRVV 
EQNLVTVDPG VVEAARSMGA SKWRTLATVV IPEGLAPLAL GYTFMFVAVV DMSAMAGYVG 
GGGLGDFARQ YGYQQANWQL TLVVIVVLIV VVQVVQFFGN WLSRRLQHRG