| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1636 |
|---|
| Symbol | |
|---|
| ID | 9155786 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1708637 |
|---|
| End bp | 1709707 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003646596 |
|---|
| Protein GI | 296139353 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0515713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCAG TAACATTCGA TCAGGCATCT CGCTTCTACT CGGGAACCGA CAAGCCCGCA
GTCGACAAGC TCGACCTGGT CGTCGAGGAT GGCGAATTCC TCGTACTCGT CGGCCCTTCG
GGTTGCGGCA AGTCGACGTC ACTGCGCATG TTGGCGGGAC TCGAGGAGGT CGACTCGGGT
GCGATCCGTA TCGGCGATCG TGACGTCACC GCGGTGCCCC CGAAGGACCG CGACGTGGCG
ATGGTCTTCC AGAACTACGC GCTGTATCCG CACATGACGG TCGGCGACAA TATGGGCTTC
TCGCTCAAGC TCGCTCGCCG ATCCGCTGCG GAGATCACCG AGCGCGTCGC CGCGGCGGCC
CGACTGCTCG ACCTGACGGA GTATCTCGAC CGTAAGCCCG GTGCGCTGTC CGGCGGCCAA
CGTCAGCGTG TCGCGATGGG GCGCGCGATC GTCCGCGAGC CGCAGGTCTT CCTCATGGAC
GAGCCCCTGT CGAACCTCGA CGCGAAACTG CGGGTTCAGA CCCGTTCGCA GATCGGGGCA
CTGCAGCGTC GGCTCAACAC GACGACGGTG TACGTCACTC ACGACCAGGT CGAGGCCATG
ACCATGGGTG ACCGCGTCGC GATCCTCAAG GACGGCCTGC TTCAGCAGTG CGCCTCGCCG
CGCGAGCTGT ACGACCGGCC GATCAACACC TTCGTCGCCG GGTTCATCGG TTCGCCCGCG
ATGAGCCTGC TGAGCGCGCG GGTCGAGGGC TCGACTGCGT TCGTCGGTGA TCTGGCGATC
CCCATGCCGC GCGAGATCGC GGCCAAGAAC AACGCTCGAG AGGTCACGGT CGGCGTGCGA
CCGGAGGGGT GGGTCGCGCA GGAGAACGGA GCGACCGTCG CCGTCACGCT GGTCGAAGAT
CTCGGCGCGG ACGAGTTCGT TCACGGTGAC CTGGTGGGTC CCGAGACGGG ACGAATCATC
GCGCGCCTCA ACACCCGGCC GGCACCGCAG GCGGGAACGT CGATTCGGCT GGGCGTCCTC
CCCGACCAGG TCCACTGGTT CTCCTCGGAC ACCGGCCTGC GGCTCGGCTG A
|
|---|
| Protein sequence | MASVTFDQAS RFYSGTDKPA VDKLDLVVED GEFLVLVGPS GCGKSTSLRM LAGLEEVDSG
AIRIGDRDVT AVPPKDRDVA MVFQNYALYP HMTVGDNMGF SLKLARRSAA EITERVAAAA
RLLDLTEYLD RKPGALSGGQ RQRVAMGRAI VREPQVFLMD EPLSNLDAKL RVQTRSQIGA
LQRRLNTTTV YVTHDQVEAM TMGDRVAILK DGLLQQCASP RELYDRPINT FVAGFIGSPA
MSLLSARVEG STAFVGDLAI PMPREIAAKN NAREVTVGVR PEGWVAQENG ATVAVTLVED
LGADEFVHGD LVGPETGRII ARLNTRPAPQ AGTSIRLGVL PDQVHWFSSD TGLRLG
|
|---|
| |