Gene Tpau_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1548 
Symbol 
ID9155698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1617997 
End bp1618461 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003646509 
Protein GI296139266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.115778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA TGACCGCGCA CGACACCGTC CACACGCCGC TGGCCGATCG GTTGAATTCG 
CTCTTCGAAT CAACCGCCAG TGGATCTGGA AAGTGCACCA ACAACGAGGT TGCGCGGGCA
TTGAAGGACC TGAACCCGGA GCTGCGGGTC AGCGGTGCGT ATCTGTCGGC GCTGCGTTCG
GGGGCGCGCG CTCGACCGTC GGTCGAACTG CTGGTGGCAC TGGCAGAGCA CTTCGGGGTG
TCGGTGTCGT ACTTCACCGC GCAGGAACCG GCTGTGCCGC TCGCGGAGAA CTATCAGCGT
CAACTGAACG AGCTCGGTGT CCGCAGGATT GCGATGCGTG CCGTCGGGCT CGACGAGGAC
AATCTGTCGA CCGTCACCAC TGTCCTCGAT CACGTGCGGA AGCTCCAGGG GCTTCCGCCT
ATTGAGGGGG ATGGCGATGA GGACGTATCT GCAGGCGCGC CGTAG
 
Protein sequence
MAIMTAHDTV HTPLADRLNS LFESTASGSG KCTNNEVARA LKDLNPELRV SGAYLSALRS 
GARARPSVEL LVALAEHFGV SVSYFTAQEP AVPLAENYQR QLNELGVRRI AMRAVGLDED
NLSTVTTVLD HVRKLQGLPP IEGDGDEDVS AGAP