| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1423 |
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| Symbol | |
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| ID | 9155572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1490234 |
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| End bp | 1491763 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | integrase family protein |
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| Protein accession | YP_003646390 |
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| Protein GI | 296139147 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00313784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCGG TCCACAAGTT CACCAGCAGA GTTGACGGCA AGCCCTACTA CAAGGTCAAG
TGGCGCACGC CCGATGGGAA GCACCGCACG AGGGGCGGCT TCGCTCGCCG CAGGGACGCT
GAGGCGTACG CGGAGACCGT CGAGTTCAGC GCGCGCCGTG GGCTCACGTT CGACCCACGC
AGCGGGGACA TGCTGTTCAG GGCCGCAGGG CAGGCGTGGT TGCAGAGCCG CACCGACCTC
AAGATCGCGA CCCGAACCAA CTACACGGGC CAGCTCCGCG CTGATGGGGA GATTGACCGC
AGGTTCGGCG GCTACCCCCT CAACAAGATC ACCCGCGAGG ACCTACAGGC CTGGGTGAAC
GAGCAGGTAG CAGGCGGTAG TAGTTCCAGC AGCGTCCGCA ACAAGTTCTT CATCGTGCGG
ATGATCCTGT CGCAGGCCGT CGTGGACCGT CGCTTGGAGT TCTCGCCCGC CGACCACGTG
AAGCTGCCCG CGCCGCGCCG GAAGGGCAAG CAGGCCAGCA CAGCGTCCGG CCAGGCCGCG
TCGATGGTCG GCTCTGCGCC ATCAGTCCAC GGATCGACTG AGGACGCCGC ATTCCTCACT
GCCGAACAGG TGGAGTACCT GACGGCCGCC ACACCCTGGC CGTACAACAT CCTTGTCCAT
ATGGCGGCGT GGACCGGCCT GCGCAGCGGC GAGCTGACAG GCCTACAGAT CGGGGATATC
GACCTTGGGC GCAACTCGAC AGTCAGCGTT CAGCGAACGG CCTTGGTTGT GCCTGGTACA
CCAGCAGACG GAGACAGCCC GGCAACTGCC CCTCGTGCCG TCTACGACAC CCCCAAGACC
CGCCGATCCA GGCGGCGCGT GCCCCTGACC GCCGCGACCG TTGCCGTCCT CCGGGACTAC
TTGGCGCCCG CGCCCCGGCT CGACGGCGGC GACCGCCGCT TCAACGCGGC AGCGACCCCA
CTAGCCCCCA GGATCGACGC CCCGAGCAGC GCGACCGGCG CGCCGACGTA CGTTCACCCG
AGAGCGGGCG ACCCCACCGC ACCGCTGTTC CCGAAGATGC GGTTGGTCGC TGGCCGGCCA
ACGGGCAAGC GCGCCCCGCG CCACGAGACC GGACCCCGCG CGGGACAACC GATGACCCCC
GAAGAACAAG CCGCACGCCG CACCGTGGCC GAAGCCCAGG CTCGCCTAGA ACTGGACTGG
AATGCCGTAC TGCTGCACAA GACCTATTAC AAGGCGGTGT TCCAACCCGC ACTACTCCGC
GCCAGCTTAG CCCTGGTGGC CGATGGGCTG CGGCCGATAC CCGAGCACGC GACCGCGCAC
AGCCTCCGGC ACACCTACGC GAGCTTCTGC GTCAGCGCGG GCCTGCACCC CAAGCAGATA
TCGAGCTATT GCGGGCACGC ATCCGTGAAC ACCACGATGG GCATCTACGC ACACCTATTC
GAGGACGACC ACACCGAAGC AATGGCCGCG CTCGGCAGCG TCGGAGCTAC CCGCCGCGAC
AACGTCACCC CGCTGCGCGG ATGGGGTTAG
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| Protein sequence | MASVHKFTSR VDGKPYYKVK WRTPDGKHRT RGGFARRRDA EAYAETVEFS ARRGLTFDPR
SGDMLFRAAG QAWLQSRTDL KIATRTNYTG QLRADGEIDR RFGGYPLNKI TREDLQAWVN
EQVAGGSSSS SVRNKFFIVR MILSQAVVDR RLEFSPADHV KLPAPRRKGK QASTASGQAA
SMVGSAPSVH GSTEDAAFLT AEQVEYLTAA TPWPYNILVH MAAWTGLRSG ELTGLQIGDI
DLGRNSTVSV QRTALVVPGT PADGDSPATA PRAVYDTPKT RRSRRRVPLT AATVAVLRDY
LAPAPRLDGG DRRFNAAATP LAPRIDAPSS ATGAPTYVHP RAGDPTAPLF PKMRLVAGRP
TGKRAPRHET GPRAGQPMTP EEQAARRTVA EAQARLELDW NAVLLHKTYY KAVFQPALLR
ASLALVADGL RPIPEHATAH SLRHTYASFC VSAGLHPKQI SSYCGHASVN TTMGIYAHLF
EDDHTEAMAA LGSVGATRRD NVTPLRGWG
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