Gene Tpau_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1388 
Symbol 
ID9155536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1458953 
End bp1459618 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, MerR family 
Protein accessionYP_003646355 
Protein GI296139112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.902771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGT CGGAACTCTC CACCGAGACC GGCGTCAGCA CCGCCTCCCT GAAGTACTAC 
CTGCGTGAAT CATTGCTGGC GCCGGGCGAT CCGATCACCC GCACCCAATC CGACTACGGC 
CCGATGCACG TCGAGCGGGT GCGGTTGATC CGCGCGCTGG CCGACTCCGG CGGGCTCTCG 
CTCGCTCAGA TCCGGCGCGT CCTGAACGCC CTTGACAGCC CGGCCGTGGC ACGTCACGAC 
ATGTTCGGCG TCGCTCAGGA GGTGCTGGTC GAAGCCTCCC CCGTCGTCGA CGACGCCGAG 
TGGAGCGCCC TCGCCGAGGG CTTCGTCCGC GAACGCGGTT GGCGGATCCA GGAGCATGAC 
CCCCTCATCC CCGTCCTGGG CAGCCAATTG CGCGCGCTCC TCGCGTCGTG CCCCGTATCG 
GATACCGACA CGCTGGATCG CTGGGCCGAC GCCTCCGAGA TGATCGCCTC CGCCGATCTC 
GACGTACTCT CCGACGACGA CGCGGAGGCG CTCAAGACCG TGATCGTCGG GACGGTGTTG 
TCCGACAAAG TGCTCCAGAC ACTGCGGCGC CTCGCCCAGC AGGACCGCAG TGCACGACTG 
CACGACGACG CACGGACCTC ACACGCCGGT CAGACCAGTA GCGACGGCCC GGCCTCCCGG 
CGCTGA
 
Protein sequence
MKLSELSTET GVSTASLKYY LRESLLAPGD PITRTQSDYG PMHVERVRLI RALADSGGLS 
LAQIRRVLNA LDSPAVARHD MFGVAQEVLV EASPVVDDAE WSALAEGFVR ERGWRIQEHD 
PLIPVLGSQL RALLASCPVS DTDTLDRWAD ASEMIASADL DVLSDDDAEA LKTVIVGTVL 
SDKVLQTLRR LAQQDRSARL HDDARTSHAG QTSSDGPASR R