Gene Tpau_1364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1364 
Symbol 
ID9155512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1423672 
End bp1424412 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003646331 
Protein GI296139088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAGG CCGCCGTCTC CGTCGAGCTG GATCGCACCA GTCCGGTGCC GTTGTACTAC 
CAACTGGCGC AGGCTCTCGA GCAGTCGATC CTGGACGGCC GCCTGGTGCC CGGAGACCGC 
ATCGAGAACG AGATCGACCT GGCCAAGCGG CTGAGCCTGT CCCGACCCAC AGCCCGACAG 
GCGATCCAGG CTCTCGTCGA CAAGGGACTC CTGGTACGCA AGCGCGGGGT GGGAACCCAG 
GTGGTCCGCA ACGAGGTGCA CCGCGCCGTC GAGCTCACCA GCCTGTACGA AGATCTCGTC 
GCCGCGGGAC AGCGACCGTC GACGGTGCTG CTGGACTACC GTCTCGGCCG CGCCGACGAG 
GAGGTCGCCG ATGAGCTCGG TATCGAGCAC GACGCCCAGG TGGTGTCCAT CCGCCGGCTG 
CGCAGCGCCG ATGACGTACC GCTCGCGATC CTGACCAATC ACCTCCCCGC GGAGCTCGCC 
CCGGCACCGG ACGAACTCCA AGCCAAGGGG CTCTACCAGT GCCTCCGCGG TCGCGGCATC 
ACGATCGCGC ACGCGCAGCA GCGGATCGGC GCCCGGATCT CCGCCGGCGA CGAGGCCGAT 
CTGCTCGACG AACAGCCCGG CGAAGCGGTC CTCACCATGC AGCGCGTCGC GTTCAACGAA 
GTGGGCACCG CCATCGAACT GGGGCGTCAC GTCTACCGCG CCTCACGGTA CTTCTTCGAC 
GTCTCGGTCT TCAGTAGGTG A
 
Protein sequence
MSQAAVSVEL DRTSPVPLYY QLAQALEQSI LDGRLVPGDR IENEIDLAKR LSLSRPTARQ 
AIQALVDKGL LVRKRGVGTQ VVRNEVHRAV ELTSLYEDLV AAGQRPSTVL LDYRLGRADE 
EVADELGIEH DAQVVSIRRL RSADDVPLAI LTNHLPAELA PAPDELQAKG LYQCLRGRGI 
TIAHAQQRIG ARISAGDEAD LLDEQPGEAV LTMQRVAFNE VGTAIELGRH VYRASRYFFD 
VSVFSR