Gene Tpau_1339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1339 
Symbol 
ID9155486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1394159 
End bp1394755 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content64% 
IMG OID 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003646307 
Protein GI296139064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGACA AACTCGTGTG GGTCGATTGT GAGATGACCG GCCTGGATCT GACCTCCGAC 
CGGCTGATCG AAATCGCCGC CCTGGTGACC GATGGCGACC TGAACATCCT GGGCGAAGGC
GTGGATCTGG TGATCCACGT CGACGATGCG GCGCTCGACG CCATGCCGCC CGTGGTGCAG
GATATGCATG CCAAATCAGG TCTCACCGAC GAGGTACGCA GGTCCACGGT GACCGTCCGT
GAGGCCGAAG AGGCGGTGCT GGCATACCTG CGCGAGCATA TCGAGCCCGG CACGGTGCCG
CTGGCGGGAA ATTCGATCGC GACGGATCGT CGGTTCATTG CTCAGGAGAT GCCGGAACTG
GACGGCTTCC TGCACTACCG GATGGTCGAT GTCAGCTCGA TCAAGGAACT GTGCCGCCGC
TGGTACCCGC GGATCTACTT CGGCCAGCCC GACAAGGGTC TGGCACACCG TGCGCTGGCC
GACATCCGCG AGTCCATCCG GGAGCTGAAG TACTACCGGA GCACAGCCTT CGTACCCGCA
CCAGGACCAT CATCGGAGGA GATCTCCGCG AAGGTCGAGG AGCTCGGGCC GGCCTGA
 
Protein sequence
MDDKLVWVDC EMTGLDLTSD RLIEIAALVT DGDLNILGEG VDLVIHVDDA ALDAMPPVVQ 
DMHAKSGLTD EVRRSTVTVR EAEEAVLAYL REHIEPGTVP LAGNSIATDR RFIAQEMPEL
DGFLHYRMVD VSSIKELCRR WYPRIYFGQP DKGLAHRALA DIRESIRELK YYRSTAFVPA
PGPSSEEISA KVEELGPA