| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1244 |
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| Symbol | |
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| ID | 9155385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 1278514 |
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| End bp | 1279668 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003646214 |
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| Protein GI | 296138971 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.994908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGTCG TCTCCGTTCC CGGAATGTCG ATCGACCGGC CCGTGCTGCG GCGCCGGGGC
CTGATCGCGG CCGCAGTCAT CCTGGTGATC GCACTCATCG TCTGGATCGC GCAGGCGGTA
TGGCCGAAGG ATGAATTCTC CTTCACCCTC CGCACGCCCA CCGTCGCGGC CGGCATCGTC
AACGGTGCGC CGGTGCGCAT CCAGGGTGTT CAGGTGGGCG AGGTCACGGG CGTCAAGGCC
GTCTCGAGCG GCCAGCAGGG CGTGACAGTC ACCATGAAGT CGGCCGATGG GAAGTCGCTG
ACCAACAATG TCGAGGCGGC GTTCTCCGCG GGTAACCTGT TCGGCGTCTC GGAGGTCATC
CTGACCCCGC GTGACGGCGG CGGCGAGCTC AAAGACGGCG CCACCATCTC CCCCACCAAG
CAGATCACCG ATAACACGGT CTCGAACATG ATCGTCACGA TCGGCGACGT CAACAACGAC
GCCCTGCGAC CCAATATGAG CACGATCCTG CTCAACTTCG ACGCCTCGTC GAAGGCGATG
CTCCCGCTGT TCACCGCGCT CGGCAACGTC GCGCAGGCGG TGCAGGACAC GCAGCGGCTG
ACCACCGCGC AGACCTTCCC CGTGATCACC GACACCCTGA TGGGCGCCGA TTCGGCGATC
GCCCAGATCA TTCCCTCGGT GCGCACCCTG TTCAATTACG CGCCCGTGCA CGACAAGGGC
TGGGTGAACC GTGGCGCAGC CACGCTGGAC GCGATCACCA ACCAGAAGGA CAGCCTCAGC
GCGGCACTGC AGAAGCTCCT CGACGCCAAG GCCCTCAAAG GCCTGGAGAC CGCGACGCCT
ATGCTGGTGA ACCTGATGCA ACCGCTGCTC AACGCCTTCC CGAACGGAAG CGCCACCGGT
GTGGGCATCC AGATCGGGCA GCTGCTCGAC AACGTGCGCA AGGCCATGCC GAACACCCCG
AACGGCCCGG TCCTCAACGT GCGGCTGTCG GTCGACTTCC CCGCGATCGC GGCGGGACTA
CCGCCCGCGC CCACGTTCAC CTACGTGCCG CCGAACCCGG GAGCCAAGCC CGGCGACGCC
AAGCCGAGCG CCAAGCCCGC TGCGGGCAGC AGCACCGCGA CCCCGAGCAC CCCGACCCCC
AAGCCAGGGA GCTGA
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| Protein sequence | MGVVSVPGMS IDRPVLRRRG LIAAAVILVI ALIVWIAQAV WPKDEFSFTL RTPTVAAGIV
NGAPVRIQGV QVGEVTGVKA VSSGQQGVTV TMKSADGKSL TNNVEAAFSA GNLFGVSEVI
LTPRDGGGEL KDGATISPTK QITDNTVSNM IVTIGDVNND ALRPNMSTIL LNFDASSKAM
LPLFTALGNV AQAVQDTQRL TTAQTFPVIT DTLMGADSAI AQIIPSVRTL FNYAPVHDKG
WVNRGAATLD AITNQKDSLS AALQKLLDAK ALKGLETATP MLVNLMQPLL NAFPNGSATG
VGIQIGQLLD NVRKAMPNTP NGPVLNVRLS VDFPAIAAGL PPAPTFTYVP PNPGAKPGDA
KPSAKPAAGS STATPSTPTP KPGS
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