Gene Tpau_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1236 
Symbol 
ID9155377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1269775 
End bp1270863 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID 
Productpeptide chain release factor 1 
Protein accessionYP_003646206 
Protein GI296138963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.417509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG GCTCCCCCTC CGCGATCGAC GACATCCTGG CCGAGTACTC CGGCCTGGAG 
CAGCAGATGT CCGATCCGGC GCTGCACAAC GACGCCTCGG CGGCGCGCAA GGTGGGCAAG
CGGTTCGCCG AGCTCGCTCC CATCATGGCC ACGCACCGCA AACTCGAGGC CGCGCGTGAG
GACCGCGCCG CCGCCCAGGA GCTGGCCGCG GACGACTCCT CGTTCGCCGA CGAGGTGACC
GTGTTGACCG AGCAGATCGA CGCGCTCGAA CAGCAGCTCA CCGACCTGCT CGCGCCGCGC
GACCCGCATG ACTCCGACGA TGTGGTCCTC GAGGTCAAGT CGGGCGAGGG CGGCGAGGAA
TCGGCCCTGT TCGCCGGCGA CCTCGCCCGC ATGTACCTGC GGTACGCGGA GCAGCGCGGC
TGGAAGGTCG AGACCCTCGG CGCCACCTAC TCCGATCTCG GCGGCTACAA GGACGCCACC
TTCGCGATCA AATCCCGCGG CCCCGGTGCT GACGGCGCGA TCGACGGCGT GTGGGCGCGG
ATGAAGTTCG AGGGCGGAGT GCACCGCGTG CAGCGCGTCC CCGCCACCGA GAGCCAGGGC
CGCATCCACA CCTCCGCCGC CGGCGTGCTC GTCTACCCCG AGCCCGACGA GGTCGAGGAG
GTGCAGATCG ACGAGTCCGA CCTGCGCATC GACGTCTACC GCTCCTCCGG CAAGGGCGGC
CAGGGCGTCA ACACCACCGA CTCCGCGGTG CGTATCACCC ACCTCCCCAC GAACATCGTC
GTGACCTGCC AGAACGAGCG CTCGCAGCTA CAGAACAAGG CCCGCGCCAT GCAGGTGCTG
GCCGCTCGCC TGCAGGCCCT CCGCGAGGAG GAGGCCGAGG CCGCTGCGTC GGACTCCCGG
GCCGCGCAGA TCCGCACCGT CGACCGGTCC GAGCGGATCC GTACGTACAA CTTCCCCGAG
AACCGCATCG CCGACCATCG CATCGGTTTC AAGGCGCACA ACCTCGACCA GGTGCTCGAC
GGCGAGCTCG ATCCGCTGCT GGACGCCCTC CAGGCCGCGG ACCGTCAAGC CCGGCTCGAG
GCCGAGTAG
 
Protein sequence
MSAGSPSAID DILAEYSGLE QQMSDPALHN DASAARKVGK RFAELAPIMA THRKLEAARE 
DRAAAQELAA DDSSFADEVT VLTEQIDALE QQLTDLLAPR DPHDSDDVVL EVKSGEGGEE
SALFAGDLAR MYLRYAEQRG WKVETLGATY SDLGGYKDAT FAIKSRGPGA DGAIDGVWAR
MKFEGGVHRV QRVPATESQG RIHTSAAGVL VYPEPDEVEE VQIDESDLRI DVYRSSGKGG
QGVNTTDSAV RITHLPTNIV VTCQNERSQL QNKARAMQVL AARLQALREE EAEAAASDSR
AAQIRTVDRS ERIRTYNFPE NRIADHRIGF KAHNLDQVLD GELDPLLDAL QAADRQARLE
AE