Gene Tpau_1167 details

Gene Information

• Locus tag: Tpau_1167
• ID: 9155307
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 1195244
• End bp: 1195951
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 71%
• Product: transcriptional regulator, MerR family
• Protein accession: YP_003646137
• Protein GI: 296138894

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCATA ACCCTCAACG CAGACTTCGA CCCATCGATC TCGCTCGCCC CCATGGTCTC 
TCGACCCAGG CCGTGCGGAA TTACGAAGAC CAGGGCGTGC TGCCCGCGGC GGAGCGCTCC 
GCGTCGGGCT ACCGGTCGTA CCGGCAACAG CACGTCACCG CGCTCGCCGC GTTCGTGGCG 
CTGACCCCGG GCTGCGGACA CGCACGCGCC GCAGCGATCC TTCGAGCAGT CAACCGGGAC 
GATCCGGACG CCGCGTTCGC TCTGCTCGAC GAGGCGCACC GGGAACTCGC CGCCGACCGG 
GCGACACTGC GGCAGGTCCG AACGGCATTG GCCGGCGTCG GTCCCACCGA CGGTGCCACC 
CCATCCGGTC CGGACGTGTT CGTCGGCGAC GTGGCCCGGT CGATCGGCGT GGTTCCGGCG 
ACCCTGCGGA CCTGGGAGCG GGAGGGGATC GTGACTCCCG ACCGTGATCG CGCGACCGGC 
TACCGGGTGT ACTCACCCGC CGACCTGCGT GACGCCCGGA TGGCCCAGCA GTTGCGGCGC 
GGTGGGTACT CGCTCGCGCA TATCGCCACC CTCACCCGCC GGGTGCGCGA GGCCGGCGGC 
GTGGAACCGT TGCGCGACAC CCTCGATGGC TGGCAGGCAT CGCTCACCGC GCGTGGCCGA 
GCCCTGGTGT CCGGCGCCGC TGCACTCGAC ACACACCTGC GCGGATAG 

 

Protein sequence

MTHNPQRRLR PIDLARPHGL STQAVRNYED QGVLPAAERS ASGYRSYRQQ HVTALAAFVA 
LTPGCGHARA AAILRAVNRD DPDAAFALLD EAHRELAADR ATLRQVRTAL AGVGPTDGAT 
PSGPDVFVGD VARSIGVVPA TLRTWEREGI VTPDRDRATG YRVYSPADLR DARMAQQLRR 
GGYSLAHIAT LTRRVREAGG VEPLRDTLDG WQASLTARGR ALVSGAAALD THLRG