Gene Tpau_0972 details

Gene Information

• Locus tag: Tpau_0972
• ID: 9155112
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 995352
• End bp: 995978
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 71%
• Product: two component transcriptional regulator, LuxR family
• Protein accession: YP_003645944
• Protein GI: 296138701

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGCATCG TCGTCGCCGA GGATTCCGTG CTGCTCGCCG AGGGGCTGCA ACGCATCATC 
GAGCGGGCCG GTCATGAAGT GACCACGGTC CTCGGCGACG CCGACGCCCT CCGCGCCGTG 
GACACCGGCA CCATCGACCT GGTGGTGACG GACGTGCGGA TGCCGCCCGG CCACGGCGAC 
GACGGCCTCC GCGCCGCCCT CGACCTGCGG GCGGCGCGGA GCGAGCTGCC GGTGCTCGTG 
CTCTCCCAAT ACGTTGCCGC CGCGTACGCC CGGCGGCTGC TCGACACCGG TGGCGCCGTG 
GGCTACCTGC TCAAAGAACG GGTGGGGCGG GTCGACGACT TCGTCCGCGC GCTCGACACG 
GTGGCCTCCG GCGGCGTGAT CGTCGATCCG GAGGTGGTGC GGAAGATGTT CACCACCACC 
GTGCTCGACC GGCTCACTCC CCGTGAGGGT GAGGTGCTCG CACTGATGGC CGAAGGACGG 
AGCAATCCCG AGATCGGTGC CGCCCTGGTG GTCTCGGACG CCGCCGTGGC CAAACACGTG 
GCGAACATCT TCGCCAAGCT GGACCTGCCA CCGGAGGAGG GGAACCGGCG TGTCCGCGCG 
ATCCTCACCT ACCTCGCCGA GCGCTGA 

 

Protein sequence

MRIVVAEDSV LLAEGLQRII ERAGHEVTTV LGDADALRAV DTGTIDLVVT DVRMPPGHGD 
DGLRAALDLR AARSELPVLV LSQYVAAAYA RRLLDTGGAV GYLLKERVGR VDDFVRALDT 
VASGGVIVDP EVVRKMFTTT VLDRLTPREG EVLALMAEGR SNPEIGAALV VSDAAVAKHV 
ANIFAKLDLP PEEGNRRVRA ILTYLAER