Gene Tpau_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0890 
Symbol 
ID9155030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp909704 
End bp910399 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003645863 
Protein GI296138620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA AGCCGACCAT CGTCCTCGTT CATGGGTTCT GGGGCGGCGC CGCTCACTGG 
GCCGGAGTGA TCGTCGAACT CCGCAAGCGG GGCTACCCCG AGCTTCGGGC GGTGGAGAAC 
CCGTTGACCT CCCTGCAGGA CGACGCCGAG CGCACCCGGA AGATGGTGGC GCAGGTGGAG 
GGGCCGGTGA TCTTGGTGGG GCACTCGTAC GGCGGTGCCG TGATCACCGA AGCCGGCAAC 
CAGCCGAACG TGGTGGGGCT GGTGTACGTC GCCGCGTTCG CCCCGGATGC GGGGGAGAGC 
CCCGGCGGGA TCACTCAGGA GAACCCGCCG GCCGGTGCCG CGGCGCTTGC TCCCGATTCC 
GACGGCTACC TGTGGATCAA GCAGGATCTG TTCCACGAGA ATTTCGCTCA GGATCTGTCG 
GCCGATGATG CGCTGGTCAT GGCGGTCACC CAGAAGGCGC CGCTGGCATC CACGTTCGGC 
GATGCGGTCA CCGATCCGGC CTGGCGGCAC AAGCCGAGCT GGTACCAGGT GTCGACGGAG 
GATCGGATGA TCCACCCCGA CAACGAGCGG CGCATGGCCG AACGGATCAA TCCGCGCGGT 
GTCATCGAAT TGGACGCCAG TCATGCCTCG CTGGCTTCGC ACCCGGCGGC GATCGCCGAT 
CTGATCGACG CCGCCGTAGC GGGGACCGCG AGCTAG
 
Protein sequence
MTDKPTIVLV HGFWGGAAHW AGVIVELRKR GYPELRAVEN PLTSLQDDAE RTRKMVAQVE 
GPVILVGHSY GGAVITEAGN QPNVVGLVYV AAFAPDAGES PGGITQENPP AGAAALAPDS 
DGYLWIKQDL FHENFAQDLS ADDALVMAVT QKAPLASTFG DAVTDPAWRH KPSWYQVSTE 
DRMIHPDNER RMAERINPRG VIELDASHAS LASHPAAIAD LIDAAVAGTA S