Gene Tpau_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0801 
Symbol 
ID9154941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp815324 
End bp816040 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003645776 
Protein GI296138533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.912886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCGG ACGGTCCGGT ACCCAAACAC GAGCAGCTGC GCTCCCTCCT CGAGAAGCGC 
TGTGCGGCAG AGCTCGCCCC CGGATCCGCC CTGCCCAGTG AGCGGCATCT GTGCGACGAA 
TACGGGGTCT CGCGGATCAC CGTCCGGGAG GCGCTCCGGC AGCTGGTCGC AGACGGAACA 
CTGGTGCGAA TCCGCGGTAA GGGCACCTTC GTCGCCGATC ACCCCGCCCG GTCCCGGCTG 
CATCTGGCGT CGTTCCACGA GGACATGCGC CGGCTGGGCC GCGTGCCGTC CACGACGGTG 
CTGCTGACCG AACTGCGGGT GCCGCCACCG TCGACCATAT CGGCGCTGGG GCTGCGCGCC 
GCCGATCGCG CCTTCCACAT CAAGCGCCTG CGCCTGGCCG ACGGCGTGCC GATCTCGGTC 
GACGACGCCT GGTATCCCGA GTACGTCGCG CCCGGTCTCG CCGAACACGA ACTGACGCAG 
TCGATCTACC AGTTGCTCCG CGCCGAGTAC GAGCGGGCCA TCGATCACGC CGAGCAATCG 
ATCGGGGCGA CCGCGGCCGA CGGTGAGCTG GCCAGTCTGC TGGAGGTTCC CGCCGGGGCG 
CCGTTGTTGG CCTTCGACCG GGTCGCCTTC TCCGGCACGG TCCGCGTGGA GCACTGCTAC 
TCCTGGTACC GATCCGACCG CTATCAGGTA CAGATGACGG TCACCGACCC CGGCTGA
 
Protein sequence
MISDGPVPKH EQLRSLLEKR CAAELAPGSA LPSERHLCDE YGVSRITVRE ALRQLVADGT 
LVRIRGKGTF VADHPARSRL HLASFHEDMR RLGRVPSTTV LLTELRVPPP STISALGLRA 
ADRAFHIKRL RLADGVPISV DDAWYPEYVA PGLAEHELTQ SIYQLLRAEY ERAIDHAEQS 
IGATAADGEL ASLLEVPAGA PLLAFDRVAF SGTVRVEHCY SWYRSDRYQV QMTVTDPG