Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0718 |
Symbol | |
ID | 9154854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 736730 |
End bp | 737617 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | low-density lipoprotein receptor YWTD repeat protein |
Protein accession | YP_003645694 |
Protein GI | 296138451 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.481919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAG CAATTATCGC GCTCGGCGTG CGCAGCGCCG AAATCTTCCG GGTCACGCTC GACGGTGCCG TCACCACCCT CCGGCGTGGC GCGCCGGGGG AGAGTCCCGA CGGCGTGGTC GTGCTCGGCG ACCGCATGTA TTGGACCACT ATGGGGCGCC CCGTCGTCGA CCCGGACAAC CCCGGTGAGG CCGGACTCGA TTACTCCGCC CGCAACGGCG GCGTCCACTC CGCGAACCTC GACGGCACCG ATGTCCGCGA TCTCACCGCG CCCGGCGACA TCACCACCGG TAAGCAACTC GCCACCGACG GCACCCGTCT CTACTGGGGC GACCGGGAGG GCTGCCGCGT GAGCCGGATC GACCTCGACG GCTCCGGTCT CACCGAGCTG GTGATCAATC AGCCGCAACC CGACCGACGT GCCGAATGTG TCGGCGTCGC CGTCGATCCC AGCCGCGGGT ACCTCTACTG GAGCCAGAAG GGTCCGGCCA AGGGCGGCCG GGGCCGCATC CTCCGCGTTG GGCTCGACCT GCCCGCCGGC GAGACCGCCG ACAACCGCAC CGATATCGAG GTGCTGTGGG ACGGACTGCC CGAACCCATC GACCTCGACA TCGTGGGTGA CACGCTGTAC TGGACCGATC GCGGCGCCGC CCCGAATGGC AACTCCCTCA ACCGGTCCCC GATTCCGGCG GCCGGCGCCG CGGGGAGCGA GCCGGAGGTC CTCGCCACCG GTTTCCACGA GGCCATCGGA CTCATCGTCG ACGAGCAGCA CGATATCGCC TACGTCTCCG ACCTCGGTGG CGGCATCCAC CGGGTAGTCC TGAGCACCGG CGACGTCGCC CTGCTCGCCG ACCTCGGCAC CCCGATCTCC GGCATCACCC GCGCCTGA
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Protein sequence | MTEAIIALGV RSAEIFRVTL DGAVTTLRRG APGESPDGVV VLGDRMYWTT MGRPVVDPDN PGEAGLDYSA RNGGVHSANL DGTDVRDLTA PGDITTGKQL ATDGTRLYWG DREGCRVSRI DLDGSGLTEL VINQPQPDRR AECVGVAVDP SRGYLYWSQK GPAKGGRGRI LRVGLDLPAG ETADNRTDIE VLWDGLPEPI DLDIVGDTLY WTDRGAAPNG NSLNRSPIPA AGAAGSEPEV LATGFHEAIG LIVDEQHDIA YVSDLGGGIH RVVLSTGDVA LLADLGTPIS GITRA
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