Gene Tpau_0615 details

Gene Information

• Locus tag: Tpau_0615
• ID: 9154751
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 635625
• End bp: 636392
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 69%
• Product: protocatechuate 3,4-dioxygenase, beta subunit
• Protein accession: YP_003645592
• Protein GI: 296138349

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGATG ACCAGCGAGC CATCAGCGCG GAGATCGCGG AGCTGAGCGA GGCCTATCGC 
GTCGGCGCGG CCCCGGAGAG CACCGCGCGG CGCGACTATC CGCCGTACCG CAGCTCCCTG 
CTACGGCATC CCACCAAGCG GCTGCACCCC GCGGACCCCG AGGGCGTGGA AATGCTGTCC 
CCGGTATTCG GGCAGCAGGA CGTGCATCCG CTGGAGTCCG ATCTCACGAT CCACCACGGC 
GGCGAGCCGC TGGGCGAGCG GATCACGGTG TCCGGACACG TGCTCGACGG TGCGGGTCGC 
CCCGTCGCGG GCCAACTCGT CGAGATCTGG CAGGCCAACG CCTCCGGCCG CTACGTCCAC 
AAGCGGGATC AACACCCCGC GCCGATCGAT CCGAACTTCA CCGGGGTCGG CCGCTGTCTC 
ACCGGTCCCG ATGGCTCGTA CCGGTTCACC ACCGTCAAGC CGGGTGCGTA TCCCTGGCGG 
AACCACCACA ACGCGTGGCG GCCGGCGCAC ATCCACTTCA GCCTGTTCGG CACCGATTTC 
ACGCAACGGT TGATCACTCA GATGTACTTC CCGGGCGACC CGCTGATCGC GCTCGACCCC 
ATCTGCCAGT CGATCGTGGA CCCGGCGGCG CGCGACCGGT TGATCGCCGA CTACGACCAC 
GAGGCGAGTA CGCCCGAGTG GTCGCTCGGC TACCGCTGGG ACATCGTGCT CGGCGGTGCC 
GGTCGAACGT GGACCGAGAA CGAGGCGTTC GGAGGTGCGG ATCGATGA 

 

Protein sequence

MDDDQRAISA EIAELSEAYR VGAAPESTAR RDYPPYRSSL LRHPTKRLHP ADPEGVEMLS 
PVFGQQDVHP LESDLTIHHG GEPLGERITV SGHVLDGAGR PVAGQLVEIW QANASGRYVH 
KRDQHPAPID PNFTGVGRCL TGPDGSYRFT TVKPGAYPWR NHHNAWRPAH IHFSLFGTDF 
TQRLITQMYF PGDPLIALDP ICQSIVDPAA RDRLIADYDH EASTPEWSLG YRWDIVLGGA 
GRTWTENEAF GGADR