| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0508 |
|---|
| Symbol | |
|---|
| ID | 9154644 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 536988 |
|---|
| End bp | 537623 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | SNARE associated Golgi protein-related protein |
|---|
| Protein accession | YP_003645488 |
|---|
| Protein GI | 296138245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTCGAAT TCGTCCAGAA CGCCGGGCCG GTGATGATCT GGCTCGTCGT GGCCGGATTC
GTCTTCGCCG AATGCGCGTT CATCATCGGG CTGTTCCTGC CGGGCGACTC GCTGCTGCTC
ACCGCGGGTC TCGCGATGGC CACCACCGGG CACTCCGCGG CCTCGGTGTG GGGGCTCGCG
CTCGCCGCCT TCCTCGCCGC CATCGCCGGT AACCACGTGG GCTACGGCAT CGGCGAGAAG
ATGGGCGATC ACGTGCTCGC CAAACAGGAC GGCCGCTACC TCAACGCGCA CAATCTGCAT
CGGGTCAAGG AGCTGATGGA CAAGCACGGA TTCTTCTCCG TGCTCATCGC CCGCTGGATC
CCATGGGTGC GCACCCTGTG CCCGCTCGTC GCCGGCGCGG TGGGCATGGA CAAGCGGAAG
TTCACCATCG CCTCGGTCCT CGGCTCGCTG ATCTGGGCTC CCTTTCTCCT GCTGGTCGGC
TACTACGCCT CGTCGGCCCT CCAGGACTAC AAGTGGGTCC TGGACTGGGC GCTGCGCGGC
ATGATCGTGA TGCTCGTCGT GGGCACCGTC GTGGGGATCA TCGGCTACCG GCGTGAGATG
GCCAAACCGA ACGTCTCCGT CGATCTCGAG GACTAG
|
|---|
| Protein sequence | MLEFVQNAGP VMIWLVVAGF VFAECAFIIG LFLPGDSLLL TAGLAMATTG HSAASVWGLA
LAAFLAAIAG NHVGYGIGEK MGDHVLAKQD GRYLNAHNLH RVKELMDKHG FFSVLIARWI
PWVRTLCPLV AGAVGMDKRK FTIASVLGSL IWAPFLLLVG YYASSALQDY KWVLDWALRG
MIVMLVVGTV VGIIGYRREM AKPNVSVDLE D
|
|---|
| |