Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0125 |
Symbol | |
ID | 9154259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 133297 |
End bp | 134004 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | protein of unknown function UPF0016 |
Protein accession | YP_003645118 |
Protein GI | 296137875 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0237504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGAATG CATTGCTCGT CAGTTTCGCC GTCGTCTTCG TCGCCGAACT CGGCGACAAG TCCCAACTCA TGGCGATGAC GTTCGCCGCC AAGTTCAAAT GGTGGATCGT GCTGGCCGGC ATCACGGTCT CGACCGCGGT CGTCCACATC GCCTCCGTCG GCATCGGATA TGCGCTCGGA TCCAGCATCC CCACCCAATT GATCACCGCG ATCGCGGGCA TTTCGATGCT GGTGTTCGCA TTCTGGACCT GGCGCGGAGA CGCGCTCTCC GACGATGAAT CGACGACCGC CGACCGGGTC ACCCGCTCGG TGTTCCTCGC CGTCACCTCG GCCTTCTTCC TCGCCGAACT CGGCGACAAG ACGATGCTCG CCACCGTCAC CCTCACCACG CAGTACAACT GGTTCGGCGT GTGGCTGGGC TCCACCGTGG GCATGGTCGC CGCCGATGCA CTGGCGATCG CCGTCGGCGC CGTGCTGGGT TCGAGGCTGC CCGAGCGAGC GGTGGCGATC GGCGCGACGA TCCTGTTCTT CGGCTTCGGC GGCTGGCTGC TGTTCGAGGC CTGGCCCGAG CTCGACGGGG TGGCGCGGAT CGTGACCGGC GCGGTGGTCG CGGTGACCGT GGCCGCTGGC CTGTTCGTGG TCCGCCGGGC ACATCACACC GCTCTCGCCA ACCCGGCCAC GGCGAAGAAC CCCGATTCAC TAGTGTGA
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Protein sequence | MLNALLVSFA VVFVAELGDK SQLMAMTFAA KFKWWIVLAG ITVSTAVVHI ASVGIGYALG SSIPTQLITA IAGISMLVFA FWTWRGDALS DDESTTADRV TRSVFLAVTS AFFLAELGDK TMLATVTLTT QYNWFGVWLG STVGMVAADA LAIAVGAVLG SRLPERAVAI GATILFFGFG GWLLFEAWPE LDGVARIVTG AVVAVTVAAG LFVVRRAHHT ALANPATAKN PDSLV
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