Gene Tpau_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_0104 
Symbol 
ID9154238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp110276 
End bp110866 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content72% 
IMG OID 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_003645097 
Protein GI296137854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAACC ACCGCAAGGC TCGCACCGCC GCGGCTGCCA TCGCCGCACT GGCCGCGCTC 
GCACTCCTGT CAGCCTGCTC GCCGTCGCTG CCCGGCTCTG CGGCTCCCGG CGACCCCACC 
CCGTCAGGCC GTCCGACGGC CGCACCGTCC GGTCCGATCG GCGCGGCCGA CGGCGCCCTC 
ACCGAGGGTG TCCCGGTCAC CACCGACACG CCCGCCATCA CCAATCTGTC TCCCGCACTG 
CGGCAGGCCC TGCAGGGCGC TGCCCGCGCC GCGAAGGCGG AGCGCGACAT CGACGTACTC 
GTGACCTCGG GGTGGCGCAC TGCCCGGTAC CAGCAGTCGC TGTTCGACGA TGCGGTCCGG 
CGATACGGGT CGACCGCCGA AGCGGAACGT GTGGTGGCCG GCACCACGTC CGAGCACGTC 
GCCGGAGACG CCGTCGACAT CGGTCCGACC GACGCCGCCG ATTGGATGAC CCGGTTCGGT 
GAGGACTACG GGCTGTGCCG GGTGTACGCC AACGAGATGT GGCACTTCGA AGCGAAGAGC 
GGCGCGCAAT GCGCGCCGAT GGTCTCCGAC GCCTCGCGCC GTTCACGCTG A
 
Protein sequence
MSNHRKARTA AAAIAALAAL ALLSACSPSL PGSAAPGDPT PSGRPTAAPS GPIGAADGAL 
TEGVPVTTDT PAITNLSPAL RQALQGAARA AKAERDIDVL VTSGWRTARY QQSLFDDAVR 
RYGSTAEAER VVAGTTSEHV AGDAVDIGPT DAADWMTRFG EDYGLCRVYA NEMWHFEAKS 
GAQCAPMVSD ASRRSR