| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1929 |
|---|
| Symbol | |
|---|
| ID | 6165039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1702528 |
|---|
| End bp | 1702872 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641669092 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_001795290 |
|---|
| Protein GI | 171186371 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGCT ACGTGCTGGA CGCCTCCGCC TTCATACACG GCAGAGATAT GAGGATCTTC
TCGGGGGCGT TGTATACAAC TAGGGAGGCG GCTGAGGAGC TGAGGGACCC CAGGGCCCAG
GCCGCCCTTG AAATACTGCG GGTGGAGGTC GCGGAGGTGG ACGAGCGGAG GGTGAAGGAG
CTGTTGAAGA GGTTCGCCGG GCTGTCGCGC GCCGACGCGT CCCTCCTCGC GCTGGCGCTC
GAGAGAGGCT GCGTGTTGGT CACAGACGAC GGCAGGCTGG CGGCGGCGGC TAGGGCCTTG
GGGGTGAGGG TCGAGGGGGT CTTCTACAGG AGGGAGAGGA GGTAG
|
|---|
| Protein sequence | MSCYVLDASA FIHGRDMRIF SGALYTTREA AEELRDPRAQ AALEILRVEV AEVDERRVKE
LLKRFAGLSR ADASLLALAL ERGCVLVTDD GRLAAAARAL GVRVEGVFYR RERR
|
|---|
| |