| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1865 |
|---|
| Symbol | |
|---|
| ID | 6164827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1642647 |
|---|
| End bp | 1643582 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641669027 |
|---|
| Product | phosphoesterase DHHA1 |
|---|
| Protein accession | YP_001795226 |
|---|
| Protein GI | 171186307 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.955345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.780671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGTG TCTTAACGGT TTTTGCGCAT GGCGACGCAG ACGGCGTTTG TTCGGCTGCT
GTCGTAGTGG CGGCGCTGGC GGGGGAGTAC GAGGAGGTTG AGGTCTATTT CACGCATCCG
GTGGACCTGC TGAAGGACTT TAGGGAGTTC GCCCGGGGCG ACGTCTACAT AGTGGACGTG
GCGATAGACG AGAAGGCGGC GGAGGAGGCT GGGCGGGTTT TCGCCGGGTA CGGGGGGAGG
GTGGTCTACG TCGACCACCA CCCCCTCTCC GCCGATTTGC CCCGTGTGGA GGTGGTGCAC
GAGGTGGGCT CCTCGGCCTC CGAGCTGGCG TATAGGCTCC TCGGCGGGAG GCTCCCCAAG
TCCTACAGCA GGGTTGCCCT CTACGGCGCC ATCAGCGACT ATATGGACCA CACGCCGTGG
GTGAGGGAGG CGTTGGAGGC TTGGGACCGC CGGATTATAT ACTTCGAGGC GGGGGTCCTG
ATGCAGGGCT TGGAGAGGGC TAGGAAGGAC CACGACTTCA AGAGGGAGGT GGTTAGGCAT
CTGGCGAAGA ACCTCCCGCC CTCTGCGATG GCTAGGCTTA TGAAGATGGC TGAGGAGCAG
GCGAGGGTCA ACGAGGAGCT CGTCTGGTGG GTGGAGAGGA ACGTCTCGCT CCGCGGCTCA
GTCGCGTTGG TGGTCAACCC GCCGGGGCCG CTCGGCTTAG CCGCCAACTT GGCCAGGGGG
CTGGCGGGGG CTGAGGTGGG GGTGGCGGCT GAGGCTAGAG GCGACATGTA CGTAGTGAGC
CTCCGTTCCA GGGGGCTTGA CCTAAACGCC TTTCTGAGGG ATTTCGCCAG GAGATACGGC
GTTTCGGGCG GGGGCCATCC AAACGCGGCC GGGGCGAGGA TCCCAAGAGA CCTCCTCCCC
GTCCTCGTGG AGGAGCTCAG CCGCCTACGT AGATGA
|
|---|
| Protein sequence | MGRVLTVFAH GDADGVCSAA VVVAALAGEY EEVEVYFTHP VDLLKDFREF ARGDVYIVDV
AIDEKAAEEA GRVFAGYGGR VVYVDHHPLS ADLPRVEVVH EVGSSASELA YRLLGGRLPK
SYSRVALYGA ISDYMDHTPW VREALEAWDR RIIYFEAGVL MQGLERARKD HDFKREVVRH
LAKNLPPSAM ARLMKMAEEQ ARVNEELVWW VERNVSLRGS VALVVNPPGP LGLAANLARG
LAGAEVGVAA EARGDMYVVS LRSRGLDLNA FLRDFARRYG VSGGGHPNAA GARIPRDLLP
VLVEELSRLR R
|
|---|
| |