| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1828 |
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| Symbol | |
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| ID | 6164735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | - |
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| Start bp | 1609013 |
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| End bp | 1609744 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641668991 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001795191 |
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| Protein GI | 171186272 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.808636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGA AAATAGCGGC GGTCTCCTTC GCCGTTGTGG TGTTGCTCTT CTACGCTCCG
TTTCTCGCGC TGGGGTACTA CATCACAGAG GGGGGAGAGC TACGGCTACC CTCCCTATCC
ATGGTGGCGT CCACCCTCCT CCTAGCCGCA ACCGCCGCGG CGATCTCCAT AGCCGTCGCC
TACCCCGCCG CCTACTACCT AGCCAAGAGG GGGACGGAGC TGGAGTTTGC CCTTCTCACG
GCCCCGCTTT GGGTGGGCAC GCTCCTCAAG GCGTACTCCC TCCTCGTCTT ATACGCCGTA
TTGGAGAAGA CGGTTGGCGT GGCCCTCTGG GGGCAACCCC TAGGCGTCTT GGTGGGTATG
GTCTACGAGT ACCTCCCCTA CTCCCTGCTT ACCCTCTACG CCTCTGCGGA GAAGCTGAGC
GAGTCCCCCG TCCACGCAGC TAGGGCGCTG GGCGCCTCCA GGATCCAAGC CTTCCTCCGG
GTGGAGCTAC CGCTTACTCT GCCGGGGGTG GCGGCCGCCT TCATATTGGT CTTCCTGTTC
GCCGCGGGGG AAGTCATTAT GCCGGCTGTA CTCGGCGCTT GGAAGGTCTA CACATTCGGC
AACTACATAT GGGACCTCTA CTTCAAGGCT AGGGACATAT TCAGCGGGAG CGTGCTATCG
CTTATGTTGA CCGGCATGTC GCTGTTGGCG ACCTACATAG TGGTGCGGAC GATACGTTCC
CTCTCGATAT GA
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| Protein sequence | MIKKIAAVSF AVVVLLFYAP FLALGYYITE GGELRLPSLS MVASTLLLAA TAAAISIAVA
YPAAYYLAKR GTELEFALLT APLWVGTLLK AYSLLVLYAV LEKTVGVALW GQPLGVLVGM
VYEYLPYSLL TLYASAEKLS ESPVHAARAL GASRIQAFLR VELPLTLPGV AAAFILVFLF
AAGEVIMPAV LGAWKVYTFG NYIWDLYFKA RDIFSGSVLS LMLTGMSLLA TYIVVRTIRS
LSI
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