Gene Tneu_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1812 
Symbol 
ID6164478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1591882 
End bp1592787 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID641668975 
Productdihydrodipicolinate synthetase 
Protein accessionYP_001795175 
Protein GI171186256 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.973565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.703771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG AGGGCGTGGT GGTGGCCACG GTAACGCCTT TTGCCAAAGA CGGCGTAAAC 
TACGAGGGGC TGAGGGCGCT CCTCTCCAAG ATAGTGGAGG AGGGCTACCA GGGGGTCTTC
CCAACCTCAT CAACCGGCGA GGTGACGAAG CTGACCTTCG AGGAGAGGGT CAAGGCGATG
GAGGTGGCCA AGGAGGTGGC GGGGGGGAGG GCTCTGGTGG TTGCAGGCAC CGGCACGGGG
GACCACCTCT CCACGATCGA AATAGCCAGG AGGTACAGAG ACGTGGGCGT AGACGTCCTC
CTCATCACGC CGCCGTACTA CATACAGTAC GACTGGGCCG CCGTCTACGC CTTCTACAAG
AGGGTGTTGG ACAAGGTGGA CATGCCCGTC GTCCTCTACA CCATACCCCT GGCCACGGGA
TACAACATAC CCGTGGAGGT CTTCGAGCTG GTGGCCAACG AGTACAGCCA GGTGGTGGGG
GTGAAAGACA GCTCGGGTGA CTTCCGCTAC CACCTAGACC TCATACACCT CCTCGGCAAG
AGGCTTTCGG TGCTACAGGG CCTAGACCTC CTGTTTGTCC CCTCCCTCCT CATGGGGGCA
CACGGGGGCG TCCTGGCGGG GCCGAACTTC CTCGGCAGAA TCACGCTTGA GCAGTACAGG
CTGGTGAAGG AGGGCAAGAC GGCAGAGGCG GTGGCGCTCC ACAACAAGCT CATGCCCCTA
TGGAGGTTCA TGGGCGGTTG CGGCCTCGTG GGGAAGCTCG GCGGTAAGTG GCCCACCCTC
TACAAGGTGG CCACCCAGAT GGTGCGGGGG ATAGACATGG GCCCGCCTAG GGAACCGTTG
CCGCCGATAG ACGACAGAGA CAGGAAAGAG CTTGAGAAGT TGCTCAAGGA CCTAGGCCTT
ATCTAA
 
Protein sequence
MRIEGVVVAT VTPFAKDGVN YEGLRALLSK IVEEGYQGVF PTSSTGEVTK LTFEERVKAM 
EVAKEVAGGR ALVVAGTGTG DHLSTIEIAR RYRDVGVDVL LITPPYYIQY DWAAVYAFYK
RVLDKVDMPV VLYTIPLATG YNIPVEVFEL VANEYSQVVG VKDSSGDFRY HLDLIHLLGK
RLSVLQGLDL LFVPSLLMGA HGGVLAGPNF LGRITLEQYR LVKEGKTAEA VALHNKLMPL
WRFMGGCGLV GKLGGKWPTL YKVATQMVRG IDMGPPREPL PPIDDRDRKE LEKLLKDLGL
I