| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1799 |
|---|
| Symbol | |
|---|
| ID | 6164700 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1578656 |
|---|
| End bp | 1580272 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641668962 |
|---|
| Product | NADH/ubiquinone/plastoquinone (complex I) |
|---|
| Protein accession | YP_001795163 |
|---|
| Protein GI | 171186244 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.928165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACGC TAGAGCTACT CCTGGCGCTT GCCTACGCCG CAGCGCTGGC CGACCTCCTA
GCCGCTAGAG GCTACGCCGC GGTGGCCGCA AGCGCCGCCT TTCTCCTAGG CGTACTCCTC
GGCGTTGCCC CCTCCACTCC ATATCTAACG GCGAAGTACT GGGAGCTTGC TGCCTTCGTT
GCCGGCATCT ACCTGACCAT CGTCGTCTAC TCCCACTTCT ACATGAGGGG CTTCGAGAGG
CCGGGCTGGT TCTGGGGGTG GATGGGTGTG TTCTTCGCCT CCATGGAGCT GTTTCTCCTC
GCCGACCACT GGGCCCTCCT GGTGGTGGGG TGGGCTGGGC TGGACCTAGC CAGCTGGGGC
CTCATCTTGA CGTATAGAGA CGGCTACGAG ATGGGCTACG TGGGCGATGG GGAATACGCC
GCCGGGATGA GGTGGCTGTG GCCTCCCTCC GCGTCGGCCC TGCGCGCCAT TTTGACCGTG
GAGGTGGGCA CCGCCGCCCT CCTCATCGGG CTGGCCGCCG CGGCGGCTCA ATACGGCGAT
TTCATGAGCA AGTGGGGGCC TCTGGGGGAC GTGGCCGCGG CACTTATACT GCTCGCCGCC
TTTGTAAAAG CCGCCCAGCT GCCCTTCACC GACTGGCTTA TGACGGCCAT GTCGGCCCCA
ACGCCAGTAA GCGCACTGTT GCACAGCTCC ACCATGGTGA AGGCGGGGCC TATCCTCCTC
CTCAAGCTCG GCGACGTCAT GCCCCACTGG GCTGCTGGGG TTGCCCTCGC TGTGGGGGCC
GCAACCGCCT TCGTCTCCGG CTTAATCGCG CTGGGCCAGA GGGAGCCTAA GCTCATGCTC
GCCGCGTCGA CCGCCTCGTA CCTCGGCATG ATCACGGCAC TGGCTCTTGA GAAGCCCCAC
GAGGCGCTTC TCCTCATATA CGCCCACGGC TTCGCCAAGG CGACCTTGTT CATGGCCGTG
GGCCACGCCA TCCACGCCAG CCACAGCCGC TTTCCCGAGG AGTACCCCCT GGCCGCCAAA
GCCGCCGTGG CGTTGTCCAT GCTTACGCTC CTCGGCATAA CGCCCCTGGG CGCGCTGGCT
AAAAACGACG CGCCGCTGTG GACCCTCGCG GTTTCGGCGC TAACCGCGGG CTACCTCGGG
AAGCTACTGA GGAAGCCGGC GGCGGCCGAG TGGGAGCCCA TGTGGGTGCC CTACCTCGCG
CTCGTCGTTG CGCCCAACTT CCTACTCTTC GCGTTGCCCA AGCCGGTTCT GTTCCTCTCC
CTGGCCGGCC TAGCGCTGGC GTTCGCTGGC GAGCCCGCCT TCCTCAAGAG GAGGCTCTAT
CTGCCCGTTC TGTTCGACCG CGTGGGGCCC GCGCTGTATA GGGCGCTCTG GAGGGCGCTG
GCGGGCTTCG ACGGTTTCGT CGACAGAGCG CTGAGAGCCG CTGCCCCCGG TTGGCGTCTC
TTGGTAGACG TGGTGACGGT GGTCGATTGG TTGGTCGACA CCGCGCTACA CGGGGGCCTT
GTGGACGCCG TGCGCAGAGC CTCCGTGAGA GTGTCTGGGC TGAGGCTGGA CTACTACCTC
TACGTCGTCG GCATAGCAGT TGCCTTCTTC TTGGCTGTGG CGCTATGGCG GGCATAG
|
|---|
| Protein sequence | MATLELLLAL AYAAALADLL AARGYAAVAA SAAFLLGVLL GVAPSTPYLT AKYWELAAFV
AGIYLTIVVY SHFYMRGFER PGWFWGWMGV FFASMELFLL ADHWALLVVG WAGLDLASWG
LILTYRDGYE MGYVGDGEYA AGMRWLWPPS ASALRAILTV EVGTAALLIG LAAAAAQYGD
FMSKWGPLGD VAAALILLAA FVKAAQLPFT DWLMTAMSAP TPVSALLHSS TMVKAGPILL
LKLGDVMPHW AAGVALAVGA ATAFVSGLIA LGQREPKLML AASTASYLGM ITALALEKPH
EALLLIYAHG FAKATLFMAV GHAIHASHSR FPEEYPLAAK AAVALSMLTL LGITPLGALA
KNDAPLWTLA VSALTAGYLG KLLRKPAAAE WEPMWVPYLA LVVAPNFLLF ALPKPVLFLS
LAGLALAFAG EPAFLKRRLY LPVLFDRVGP ALYRALWRAL AGFDGFVDRA LRAAAPGWRL
LVDVVTVVDW LVDTALHGGL VDAVRRASVR VSGLRLDYYL YVVGIAVAFF LAVALWRA
|
|---|
| |