Gene Tneu_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1793 
Symbol 
ID6165128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1572844 
End bp1573806 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID641668956 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001795157 
Protein GI171186238 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.096157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.688521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC CGATGGACAT ACTGGCGGCA GTGGTGTTTC CAGGGGTACT AGGCGTCTTC 
GGCTTTTTAG TGGTGGCCAT CTGGCTGGAG AGAAAGCTAG TAGCGAGGAT CCAGTGGCGC
TACGGGCCTC TCTATGTGTC CAAGAGCGTT GGGGGCTTCC TCCAGCCGAT CGCCGATCTG
GTTAAGCTCG TCTTCTCGGA GCTGGTTCTG CCGGCCCACA CCAACAGGCT TCTCTTCGCC
GCGACCCCGA TTTTCCTCTT CTTTGCGGAG GCCGTGCCCC TTATCTTCAT AGCGCCGGCG
CCCGGCCTCG TCATCGCCTA TCAGCCGTAT GGCTTAGCCA TCGCCCTCGT CCTAGTCTTG
CTGGTGGCAG TGCTGGTGGT GACTATGGCT TGGACGGAGG CCGACAAGTT CACCTACATC
GGCGCGGTGA GGGAGATCTT GTTGACCGCG GCCTATGAGG TGCCTCTCCT CTTGGCCGCC
CTGGCCATGT TTATCCTCTA CAAGTCGGCT GACCCATACG GCGTAGTGGA GGCGCAGAGC
GGCCTCTGGG GCGTCCTCCT GAACCCGCTG GCCTTCGCGG TATATCTAGT GGCCCTTCTA
ATGTCCACCA CGAGGCTCCC CTTTGAGATA CCGGAGGCCG AGCCCGAGGT TGTCCTCGGG
CCCTATACGG AGTACGGCTC CACCCTCTTC ATCTACGCCT TCGGCGCAAA CTACGTCAAG
CTCTACACCC TGTCTCTACT AGGCGCCGTC TTGTTCCTTG GCGGCTGGGC ACCCGCCGCC
GGCCTCCTAG GCGCCGCCGT GACCGCCACG AAGATGGCGG TCTTTGTCTT ACCCGCCCTA
CTGGTTAGAG CCGTCTACCC CCGCTACAGG ATAGACCAAG CGCTTAGGCT GGGCTGGGGC
AAGCTACTGG CCCTCTCGGC GGCGGCCGTG GCTTGGTCAA TCGCCGTGGA TCTGCTATGG
TAG
 
Protein sequence
MSIPMDILAA VVFPGVLGVF GFLVVAIWLE RKLVARIQWR YGPLYVSKSV GGFLQPIADL 
VKLVFSELVL PAHTNRLLFA ATPIFLFFAE AVPLIFIAPA PGLVIAYQPY GLAIALVLVL
LVAVLVVTMA WTEADKFTYI GAVREILLTA AYEVPLLLAA LAMFILYKSA DPYGVVEAQS
GLWGVLLNPL AFAVYLVALL MSTTRLPFEI PEAEPEVVLG PYTEYGSTLF IYAFGANYVK
LYTLSLLGAV LFLGGWAPAA GLLGAAVTAT KMAVFVLPAL LVRAVYPRYR IDQALRLGWG
KLLALSAAAV AWSIAVDLLW