| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1788 |
|---|
| Symbol | |
|---|
| ID | 6165135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1569318 |
|---|
| End bp | 1569851 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641668951 |
|---|
| Product | NADH dehydrogenase (ubiquinone) 30 kDa subunit |
|---|
| Protein accession | YP_001795152 |
|---|
| Protein GI | 171186233 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.489696 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCA AAGCCCCACC CAAGTGCCCG CCGCCCGCCG ACCACCCCCT GCTCGAGAAG
CTGAGGACAG CGCTGGGGGA CGCCCTCCTG AGCCACGGCG TAACGCCAGA GGGCCACCTG
TGCCTCATGG TGCCCCCTGG GAAGGTTAGA GAAGTCGCCG CCAAGCTGAA GGAGCTGGGC
TTCGACCACG TCCTCTCACT AAGCGCGATG GACTACATGG CAGAGGGCAA GTTCCTGGTG
ATGTACGTCT ACGCCTCATA CCTCAACCCC GACCTCAAAA ACCAGCTCCT ACACGTCAGA
GCCGAGATCC CGCGCAACGA CCCCAAGATA GCCTCCATAG CCGACATATA CCCCTCAGCC
GACTACGACG AGAGGGAGTG CCACGAGATG TTCGGCATAT GGTTCGAAGG AAACCAACAC
ATGGGCAAAC GCTTCCTACT AGACCCAGAC TGCTGCATAG ACGAAAAGAC AGGCAAACCC
CTCTACCCAC TACGCAAAGA CTTCAAAGTG CCAGACTGGG GACTGATGGG CTAA
|
|---|
| Protein sequence | MAVKAPPKCP PPADHPLLEK LRTALGDALL SHGVTPEGHL CLMVPPGKVR EVAAKLKELG
FDHVLSLSAM DYMAEGKFLV MYVYASYLNP DLKNQLLHVR AEIPRNDPKI ASIADIYPSA
DYDERECHEM FGIWFEGNQH MGKRFLLDPD CCIDEKTGKP LYPLRKDFKV PDWGLMG
|
|---|
| |