| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1734 |
|---|
| Symbol | |
|---|
| ID | 6164819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1526603 |
|---|
| End bp | 1527514 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641668897 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001795098 |
|---|
| Protein GI | 171186179 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
|---|
| TIGRFAM ID | [TIGR00322] diphthamide biosynthesis protein 2-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00147027 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGCGG TTGAGGTACA CCCCCTCGCA TGGGAGGCGG GGCCGGACAC CCTCATCGAG
GCGCCCCCCG GCTTCAAGTG GTTGGCGTTG GAGATAGCGG AGAAAACCGG CGCAACCGCG
TCAGGCCGGC CCGTCTGGGG GTCCTGCGAC GTCAGAACGG ACCCCCGCTA CAGGCGGATA
TTCCACCTAG GCCACGGCGT GCCCCCCAAC GTGGCCCACC TCCTCCAGAG GAACCTCGGA
GGCGACCTGG AGAAGATAGA GCAGGACCTC TACAGGCTTA AGACGGGGAA CGTCCAGATA
TACTTCATCC CCGTATACTA CAAGCCGCCG CCCCGCCTCC CCAAGATCGA AGGAGCGGGG
AAGCTCTACT TCCCACTACC CTACAGGAAA ATAGCCGAGG CCATCCGGCG GGAGAGCGGC
ATCCCCACGG CGAGGGAGCC CATCACGGGC TGCTGGGTGG GGGAGCCGCC GGAGGGGCCG
GCGTACGTGG TAGCCACAGG CCTGTTCTAC CCGCTGACGC TCAAGTTCTT CTACCCCGAG
GCCGAGGTGT ACCAGGTGGA CCCCTTCCGG GGCGAGGTGA GAAACGTCGA GCAGGACTTC
GCCAGAGTTA TGAAGCTCAA GGCGCGCGCC CACGTGGCCG CCCCACGGCG CATCGCGGTT
TTGCTCACCA CGAAGCCGGG CCAGCGGCAG GACGAAAAAG CCGAGGCGCT CGCCCGACGC
GGCCTCACCG TGGTTCTACT CGACGAGGCC GCCCCCGAGT ACATAGACGA CCTCCAGTTC
GACCTCGTCG TAAACACGGC GTGTCCCCGC ATAGGGATAG ACGACCTCGA CAGGATAAGA
ACCCCCGTGT TGAACTTCCA CGAGTTCATA GAGGGCAGGC TGGACCCGAG AACCGCCATA
AGATTAATTT AA
|
|---|
| Protein sequence | MEAVEVHPLA WEAGPDTLIE APPGFKWLAL EIAEKTGATA SGRPVWGSCD VRTDPRYRRI
FHLGHGVPPN VAHLLQRNLG GDLEKIEQDL YRLKTGNVQI YFIPVYYKPP PRLPKIEGAG
KLYFPLPYRK IAEAIRRESG IPTAREPITG CWVGEPPEGP AYVVATGLFY PLTLKFFYPE
AEVYQVDPFR GEVRNVEQDF ARVMKLKARA HVAAPRRIAV LLTTKPGQRQ DEKAEALARR
GLTVVLLDEA APEYIDDLQF DLVVNTACPR IGIDDLDRIR TPVLNFHEFI EGRLDPRTAI
RLI
|
|---|
| |