| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1708 |
|---|
| Symbol | |
|---|
| ID | 6165528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 1502969 |
|---|
| End bp | 1503508 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641668873 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001795074 |
|---|
| Protein GI | 171186155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.000325099 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGC TGAGGCTACC GCCCAGCGTC AAGAGGGTCG TGGAGATATG CCGCTCCATG
GGGTTTAAGG TATTTCTAAT CGGGGCCCGG GCTTTGGAGT TCTACGGCGT GGTGAGGCAC
ACGGCCGATT GGGACCTGGC TATAGATCAG CCGTTCACTG TGGAGGTGAG GGATAGGCTC
ACCGAAGCGT TGAGGGGGGC AGGCTACGCT GTGCAGTGGA GGAAGTGGGG ACTGTACGTC
GACGCGGCGG GCGTCCATAT ATACCACGCG CCCCTCATGC TAGACAGCGA CTTTATTTCC
AGGTGTAGAG AGGCGGGAGG CGTCTTTATC CCATCCCCGG AGGATCTAGT TATCTTAAAG
CTTGCCAGCG GCGAGCGTAA AGACATAGAT GACTTGAAGA GGCTTCTCAG ACTGCCGCTC
GACTTATCTT ACCTCAAAAA GAGGGCTCTC CAGGCGGGTC TGGATAAGGA GCTGTGGAAG
ATCTGGCGGA GCCCCCCTTT GCGGCGCCCG GCCTCTCCGG GAGGGCTCGG ACACGCCTAG
|
|---|
| Protein sequence | MSELRLPPSV KRVVEICRSM GFKVFLIGAR ALEFYGVVRH TADWDLAIDQ PFTVEVRDRL
TEALRGAGYA VQWRKWGLYV DAAGVHIYHA PLMLDSDFIS RCREAGGVFI PSPEDLVILK
LASGERKDID DLKRLLRLPL DLSYLKKRAL QAGLDKELWK IWRSPPLRRP ASPGGLGHA
|
|---|
| |