| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1645 |
|---|
| Symbol | |
|---|
| ID | 6165634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1453278 |
|---|
| End bp | 1454714 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641668808 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001795013 |
|---|
| Protein GI | 171186094 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.467673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTGG AGCTCCGGGA TATCCACAAG GTTTTTTCAG ACGGCACACA CGCCTTAAGG
GGGGTTACCC TCGAGGTTTT GCCCGGCGAG GTGTTGGCTC TGTTGGGCGA AAACGGGGCT
GGCAAAACCA CCTTGATGAA GATCGCAGCC GGGATCTACA AGCCCACATC TGGCGATATC
TACATAGACG GCAGGCCCGT CAAGATGAGG AGCGCCAGAG ACGCCTTAAA GCTGGGCATA
GCCATGGTGC ACCAGCACCT ATCCCTTATT CCAGGCCTCA CGGCGATGGA AAACCTAGCC
ATAGTGGAGG GAGCAGGCCT ACGGCCTATC TCAGCGGAGC TGAAGACCAG AGCGCTCAAG
GTGGCCGAGG AGCTTGGGTT CGAGGTGGAT TGGGATAGAG ACGTGGAGGA GCTACCGCTG
GGCGTCAGGC AGAGGGTGGA GATAGTCAAG GCGCTTGCGT GGGGCGCCGA CTTGCTCATC
TTGGACGAGC CCACCACGGT GCTCACCCCG CCCGAGGTCA AGCCTCTATT TCAGGTCATT
AGGAGACTGA AGGAGATGGG CAAATCCGTG GTCTACATCA CCCACAAGAT ACCCGAGGTC
TTGGAAATCG CGGACAGGGT GGTTGTGTTA AGAAGGGGGG TAAAAACGGC TGAGTTCACG
CCGCCCTACG ACCCCAAGAG GCTTGTGGAG TCCATGGTGG GCGAGCTGAA GACCGAGAGC
GTGGCTAGGG AGGGGAAGCC CGGCGAGAGG CCGGTGTTGG AGGTGGAGGA TCTGTGGATA
TACGAGGGGG GCAGAGCCGT GCTCCAGGGG GTCAGCCTAA GGGTGAGGGA GAGGGAGATC
CTGGCGGTGG TCGGGGTGGA GGGGAACGGC CAGGAGCAGC TCGTAGAGGC TGTGGTGGGC
GTGAGGAGGG GGAGGGGCCT TGTTAAAGTC CACGGGGGCT TGGCCTACAT CCCGGACGAT
AGGCAACGGA AGGCCCTTCT GATGGAGCTC TCGCTTGTGG AAAACGCGAT AGTTGGGAGG
GAGAGGGAGT TCGCGAGGCG CGGCTTGATA TCGTGGAAGC TTGCCGCGGA GTACACCGAA
GGCCTAATTA GGGAGTTCGG CATAGTGACC CCTGGGCCTT GGGCCTCGGT AAGACAGCTC
TCGGGGGGCA ACCAGCAGAA GCTCGTCGTT GGTAGAGAGC TTGGCAGAGG AGCCAAGCTC
ATAGTGGCGC ACCAGCCCAC CCGCGGCCTC GACGTGGCTA CCACGGAGCA CGTCCACAGC
CTTCTCATAA AGGCAAGAAA CGGCGGCGCA GGAGTTCTAC TCGTCACAAG CGACTTGGAC
GAGGCATACA AGCTGGCGGA CACCATAGCG GTGATCTACA GAGGGAGGAT AGCGGCGCTG
GGGCCCGCCG GCGAGATGGG GGTTGAGCTG GTGGGGAGGA AGATGGCGGG GCTATGA
|
|---|
| Protein sequence | MRLELRDIHK VFSDGTHALR GVTLEVLPGE VLALLGENGA GKTTLMKIAA GIYKPTSGDI
YIDGRPVKMR SARDALKLGI AMVHQHLSLI PGLTAMENLA IVEGAGLRPI SAELKTRALK
VAEELGFEVD WDRDVEELPL GVRQRVEIVK ALAWGADLLI LDEPTTVLTP PEVKPLFQVI
RRLKEMGKSV VYITHKIPEV LEIADRVVVL RRGVKTAEFT PPYDPKRLVE SMVGELKTES
VAREGKPGER PVLEVEDLWI YEGGRAVLQG VSLRVREREI LAVVGVEGNG QEQLVEAVVG
VRRGRGLVKV HGGLAYIPDD RQRKALLMEL SLVENAIVGR EREFARRGLI SWKLAAEYTE
GLIREFGIVT PGPWASVRQL SGGNQQKLVV GRELGRGAKL IVAHQPTRGL DVATTEHVHS
LLIKARNGGA GVLLVTSDLD EAYKLADTIA VIYRGRIAAL GPAGEMGVEL VGRKMAGL
|
|---|
| |