| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1622 |
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| Symbol | |
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| ID | 6165787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1436021 |
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| End bp | 1437115 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641668783 |
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| Product | THUMP domain-containing protein |
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| Protein accession | YP_001794991 |
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| Protein GI | 171186072 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1818] Predicted RNA-binding protein, contains THUMP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.92065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACCTTG TGATAAAGAC CAGAAGGGGC CTAGAGAGGG CGGCGGCCTC CGTGGTTAAA
GAGCTGTTGG GCCCCGGGGC GGAGGTGGAG GCAGCGCCCC ATGGATATTT AGGGATAGTC
GTAGCGAAGG GCTTGGGCCC GGACAAGTGG AAAGCCGCCG AGTTGATAGC CGAGAAGGCT
CCCGAGGCGG ACAGAATCCT CGTGGTAGAG GCGCTGGTCA AGGCGGAGCT CCCCGAGATA
GAGAAGGCTG CGGTGGAGGT GGCCAAGCGG TATATAAAAG CCGGCGACAC GTTTGCGATA
CGCACCACGA GGAGGGGGGT CCACGGCTTC ACCTCGGTGG ACGTCAACGT GAGGGTGGGG
GCGGCAGTTA AGGAGGCCAC CGGGGCCGAG GTCGACCTGG AGGAGCCCAC GAAGCCTTTG
TATATAGAGA TCTTCCAAGA CGTCGCGGCT GTATGTGTAC CGGCCACCCG GGAGTACAGA
AAACTTAGGC GAGATAAGCC GCTCCCCCTG GCCGTTTTTA GGAAGATGGC GGTGGGCCAG
TTCGTCTACG AGGGCGACGA GGAGGCCGTG AGGAAGATGG GCGAGAGAAT CGGCAGGGCG
GCACAGACCT TCGAAGTCGG CGAGCTAGCC GTCCTCCTTC ACAAGCCCGT GTCTGGGAGA
ACTCTGAGGA TCTTCCTGGA GGCGGTGGAG GAGGGCATAG AGAGTAGATA TCAGATACAG
GCGAAGAGCT ACGGCAGGCC GGTGAGGAGG GTTCCGCTCT ACGTCCACGA ACTGTATCAA
TACGTGAGAG ATAGACATGG CGAGCCCATC GTGGTCACAG ACCCGAAGGG CGACTACATC
ACCCACGTCA AGGACAAGCT AGCGGATCTG TTCAGAGAAG ACCGGGTAAA CGTGTTGGTG
GGGTCCAGGG AGGGGGTGCC GCCCGGCGTC TACCGCTTCG CCGCCCTGGT GGTGGACCTG
GTCCCCGAGG TGACGATAGC CACAGACTTC GTCATACCCT CCCTGGCCAT AGCCATAGCA
AGCGCGTTGG AGGAGGCGGG GGCTCTCCCC AGATATGTGG GAAAGAGGGG GAGGGCTGGG
CAAAAAGATA AATAG
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| Protein sequence | MDLVIKTRRG LERAAASVVK ELLGPGAEVE AAPHGYLGIV VAKGLGPDKW KAAELIAEKA
PEADRILVVE ALVKAELPEI EKAAVEVAKR YIKAGDTFAI RTTRRGVHGF TSVDVNVRVG
AAVKEATGAE VDLEEPTKPL YIEIFQDVAA VCVPATREYR KLRRDKPLPL AVFRKMAVGQ
FVYEGDEEAV RKMGERIGRA AQTFEVGELA VLLHKPVSGR TLRIFLEAVE EGIESRYQIQ
AKSYGRPVRR VPLYVHELYQ YVRDRHGEPI VVTDPKGDYI THVKDKLADL FREDRVNVLV
GSREGVPPGV YRFAALVVDL VPEVTIATDF VIPSLAIAIA SALEEAGALP RYVGKRGRAG
QKDK
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