Gene Tneu_1450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1450 
Symbol 
ID6165725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1289682 
End bp1292273 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content59% 
IMG OID641668608 
Producthypothetical protein 
Protein accessionYP_001794821 
Protein GI171185902 
COG category[R] General function prediction only 
COG ID[COG2409] Predicted drug exporters of the RND superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAAGA CCGTCGTTGC CGCGCTTGTC CTCTTGGCCA TGTACATCTA CCTAGCCGTC 
CAGGCGCCGC ACGTCTTCGA CGTGTTGATC TACGACGAGT CCAAGCTCAT GCCTCCCGAC
ATCGAGCCGA AGCTCGTAGA GTCGATTGTC GGAAGCGGAG GCGGGAGCAA GGCTGTGCCC
ATCGTCATCT CGGGCCCCCA CCTGGAGGAG AAGGCGAGGA ATCTAACGCG GATTTATCCC
AACGCCGTAA CGCCGTGGAC GATCCTCGAC GCCGCCACGA GGATCTACAG GGATAAAATA
GACGCTGCCG TGGACAACGC CACCGCCCGC TTCAGAGAGG CCGCCTTCCA CATATCCAAC
TCCACTAGGG AGATGTGCGA CAAGTTGGAA ATCCTTGCGA GAGTCTATGC GGAGTCCAGA
GAGGCGGCAA AGCGCCTTAT CCTCGCCACA TACGGCGTTG CGGCCTCTGG GAACGCCTTC
GACAACAGGA CGAAGAGGTT CTTAGAGGCG TATGCGAGAT ACGTTGCGAT CTACGACGTA
GACACCGCCG TCAGGAAGGC GGCTGACGAA GCATATGGCA ACGTCTCGAC GTATCTAGCC
AACGTGACCT GGAGAACATG GGCAAGCGAG GGCGCAGTGG AAAACGTCAC ATATGCCATA
CTCAGGGGCA GGCTGAATTC CACAGCCCTG GAGATCGCCC GGGCCGTGGC AACGGTGGGG
GTGAGGCAAT ACGTGTACCT CTCAGCCCTG GATAAAACCC CTCCGATTCT CAGGCCATAT
CTGCCTCAGC TGGTGTGTGG GGGAGACGTG GAGAGAGCCG TGTCGATGTT TAGAGAGGAG
CTTATGCGGA ATCTCACTGC GCGTTTCCCG CCGCCTACCA TATATACGGT GGAAGCAGCG
GCGAAGTTGG TCTACCAGGG CAGATACGCC CTGGCGATAG TCGAGACAAA CCAAACGCCT
AGTGTGCCAC GTGGGCTTGG GGTCCCCGTC TCCTCGGCCC TCCTCCTCAA GAGCTTTACA
AACGTAGTGA CCGAAGACGT CTCAAAGATA GACAGAGCGA CAGCCGCCTC TCTCTTCGTG
GTACTCCTCT ACGTCATGGG CACACTCCTC ACCCCAGCGC TGATAGTATC GACAGTGGGG
CTTACGTATC TGGCGGTCCT GGGCTTCTTC CACCAGATAC ACGACATCCA GGGGATCTAC
TACATCACCG TGTATATGGC GGCGCCCGTG GTCTTCGCCA TAGGCGTTGA CTACATGCTA
CTGATGGCCA GCAGATATGC GGAGGAGCGC GCCCTGGGGA AGGAGAAGGA CGAGGCCATA
GTGGCTGTGA GGCGCTACGC CAACAGAGCC ATAGCGGCTA GCGCCGCGGT GGTCGCCACA
TCTCTCGGCT CCTTCGCCCT ATCTCGCCTG CCCTTTATGC AGACGATAGG GATAGGGTAC
CTCATAACCA CAGCCTTCGT CGTAGCGACC GTGTTTCTGA TCCTCCCCGC CCTCCTCTAC
CTCCTCGGAG ATAGGATATT CTGGCCTAAA AAGACCGTTT CCCACGCCGG CAGATCGCGG
ATAATGGAGA GGGCCGTTGC GGCGGCCCTC AGAAGACCTC TCCTCGTGGC GGCTCTCGCG
GCGTTTGCCA CCGCCCTCTC CGCCCTCTAC TTGGCGACCA GCTTGAAAAT AACGGCGAAT
CCGGTCGTGG CGATGCCGGA GACGGAGTAC AAGAGGGCGC TTGAGATAGC CACCACCTAC
TTCCCCAACG TGACTGCAAT ATCAACTACG TACATAGCGA TGAAGAGCCC CCCACCGCCG
GGCCTACTAC GGGAGGTGGA AAAGCTACCT CACTACGTTA ACTACACGGT CGAGAAAAGG
GGTGAGTGGT ACATCGTGTC CATAAGGCTG TCTGTGGAGG ATACGTCGGA CGCCCTTCTG
GAGATATACC ACAGGCTTGA CGAGCTTAGG CAGAGGTACG GCCCCTACTT GATAGGGGGC
TCGGCCTCCT GGAAAAACGT GATCTTTAGC GAGATATACG TGAGGTTCTG GACCTTCCAG
GTTTACGTCG TCGTCGCGGC CGCCTTCGTG GTTCTGGCGC TCCTCCTCAG GAGCTTCGTA
ATACCGCTAC GCCTAATCGC TACGGTTCTG ATGTCTATCG CGTGGAGCCT AGCCGCGGAG
GTGGCGCTGT TTCAAGACCT ATTGGCGCAG CCCACCTATT GGCTTGTCCC CATCATACTC
TTCTCCTTCC TAATGGCCGT GGGGACGGAC TACGACATTT TCATAGTCAC GAGGATAAGA
GAGGAGCTGG AGCGGGGCTA CGACGAGAGG GAGGCCATCC GGAGGGCCAT AGTCACCACG
GGCCCCGTGG TCACCGGCGC CGCAATAATA CTAGCCGCGG CCTTCTCCAC ACTAGCCCTC
TCCCAGATAC TGCTGTTGAG ACAGGTGGGC TTCACCATAG CGCTGGCCGC TCTGATAGAC
GCCTTCGTCG TTAGACCCCT GGTGGTGCCT GCGCTCATGG TGTTGGCCGG GAGGTACAAC
TGGCTCTGGG TGGGGGGTAT CAGAACAGTG CCAATTAAAG GCCAGCCCCC CGCCGGCGTT
CGGCAGCGCT GA
 
Protein sequence
MRKTVVAALV LLAMYIYLAV QAPHVFDVLI YDESKLMPPD IEPKLVESIV GSGGGSKAVP 
IVISGPHLEE KARNLTRIYP NAVTPWTILD AATRIYRDKI DAAVDNATAR FREAAFHISN
STREMCDKLE ILARVYAESR EAAKRLILAT YGVAASGNAF DNRTKRFLEA YARYVAIYDV
DTAVRKAADE AYGNVSTYLA NVTWRTWASE GAVENVTYAI LRGRLNSTAL EIARAVATVG
VRQYVYLSAL DKTPPILRPY LPQLVCGGDV ERAVSMFREE LMRNLTARFP PPTIYTVEAA
AKLVYQGRYA LAIVETNQTP SVPRGLGVPV SSALLLKSFT NVVTEDVSKI DRATAASLFV
VLLYVMGTLL TPALIVSTVG LTYLAVLGFF HQIHDIQGIY YITVYMAAPV VFAIGVDYML
LMASRYAEER ALGKEKDEAI VAVRRYANRA IAASAAVVAT SLGSFALSRL PFMQTIGIGY
LITTAFVVAT VFLILPALLY LLGDRIFWPK KTVSHAGRSR IMERAVAAAL RRPLLVAALA
AFATALSALY LATSLKITAN PVVAMPETEY KRALEIATTY FPNVTAISTT YIAMKSPPPP
GLLREVEKLP HYVNYTVEKR GEWYIVSIRL SVEDTSDALL EIYHRLDELR QRYGPYLIGG
SASWKNVIFS EIYVRFWTFQ VYVVVAAAFV VLALLLRSFV IPLRLIATVL MSIAWSLAAE
VALFQDLLAQ PTYWLVPIIL FSFLMAVGTD YDIFIVTRIR EELERGYDER EAIRRAIVTT
GPVVTGAAII LAAAFSTLAL SQILLLRQVG FTIALAALID AFVVRPLVVP ALMVLAGRYN
WLWVGGIRTV PIKGQPPAGV RQR