| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1317 |
|---|
| Symbol | |
|---|
| ID | 6165444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 1178110 |
|---|
| End bp | 1178976 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641668472 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001794690 |
|---|
| Protein GI | 171185771 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0499504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.458714 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTAG AGCAAGCCGT TGCGCTGACC TCCGAGGCTC TCCGGAGCGC AACGCCTATT
CTGCTGGCTA CGCTTGGGGC AATCGTGGGG CAGAGGGCCG GGGTGTTGAA CCTAGCCCTG
GAGGGGGTGG TCTATCTGTC GGCCGCGGTG GCGGCCGTGG TTGGCCCTCC CTGGGGCATC
CCCGCCGCCG TCGTTGTGGG GACGTTGTAC AACCTGCTGT ACTACTTCCT ATCTAACGAC
CTTGCCATGA ACCAGATACT TACGGGATTC GCCTTCACGA TGGTTGGATA CGGCGTGGGG
TCTCAGATCG CTAAAGATGT AGTTGGGAAA CCGGTGGAGA CCTACGTGGT GCACGGCACA
GAGGCCTACC TAGCCGCCGC GCTCGTCGCC GCCGCCGTGT ACTTTCTGCT CAAGAGCAGG
CTAGGCCTCG CGATTAAGGC CTCGGGCGAT GACCCCGCCT CGCTGGACTT AATCGGGGTC
GACGTCTACA GAGTGAGGAA GATAGCTGGG GCCGTAGAGG GGTTGCTGGC GTCTGTGGCG
GGGGTCTACC TAGTGTATGT ATACTACGGT AGCTGGAGCG AGCAGCTGGT GGTGGGCTGG
GGGTCCCTTG CCGTTATCAC GGCCATGATC TCCCTGTGGT CGCCTCTGAT CGCGGTGGGG
GCCTCCATCG TGCCCTCCGT TTTTATGTCG CTTTCATACG TGCTACAGAG GTACCTCGCC
GTGTCGCCGT ATCTGCTTAA CGTAACGCCC TACGCGGTGA CCATCGCGGT GCTCGCTATT
GTACAAACCG TCGCAGGTAG GACGAGGCTT AAGGCCGGCG TGCCGAGGTG GCTAGCGAGG
CCGTACATAA GGGAGGAGAG GGCCTAG
|
|---|
| Protein sequence | MAVEQAVALT SEALRSATPI LLATLGAIVG QRAGVLNLAL EGVVYLSAAV AAVVGPPWGI
PAAVVVGTLY NLLYYFLSND LAMNQILTGF AFTMVGYGVG SQIAKDVVGK PVETYVVHGT
EAYLAAALVA AAVYFLLKSR LGLAIKASGD DPASLDLIGV DVYRVRKIAG AVEGLLASVA
GVYLVYVYYG SWSEQLVVGW GSLAVITAMI SLWSPLIAVG ASIVPSVFMS LSYVLQRYLA
VSPYLLNVTP YAVTIAVLAI VQTVAGRTRL KAGVPRWLAR PYIREERA
|
|---|
| |