Gene Tneu_1172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1172 
Symbol 
ID6165287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1062006 
End bp1062665 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID641668322 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_001794547 
Protein GI171185628 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.012735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATAG TCCTATTTTC TCACTCTCTT GTGTTGGTTA AGATCTGCGG CGTGGCGAGG 
CCGGAGGATG TGGAGCTTCT GGACGGCCTT GTGGACTACA TCGGCTTTAT AGTGGAGCCC
TCCAGCCCCC GGTCGGTGGA GCCTAGGCGG CTCGGGGGGC TGGCGCGGCT GGTTAGAGAG
AGCAGGCCCG TGCTGGTGAC GGCTTCTCTC CCGCCTGCCG AGGCCGTGGA TCTGGCGGCG
TCGCTGGGGA TCCCGGTGGT CCAGCACCAC GGGTCTCTGG GCGACGGCCA CTTCAGCTAC
GCGGAGGAGA GGGGCGTGGC CCTCGCGCCG GTGGCGGTGT ACAGGCGGGG GGCCGACCTG
AGAGCCGCCG TGTCGCAGCT CCTCTCCAAG CCCCATGAGT ACGTCCTAGT AGACGCGGAG
AAGGGGAGCG GGGAGAGGTT CGAGGGCGGC CTCAAGATAC CGCTCCATGT GCTTGCGGAG
GTGGCGCACA TGGGGAAGGT GGCGCTCGCC GGAGGCATCA CGCCGGAGAA CGCCCACCTC
GTCGCGGCGC TGAGGCCCTA CATGGTGGAC GTGGCAAGCG GCGTGGAGTC GTCGCCGGGG
GTGAAGGACC CGGGGAAGGT CAAGGCCCTC CTGAGGGCTC TCGGCCGCCT CTCCGGCTGA
 
Protein sequence
MFIVLFSHSL VLVKICGVAR PEDVELLDGL VDYIGFIVEP SSPRSVEPRR LGGLARLVRE 
SRPVLVTASL PPAEAVDLAA SLGIPVVQHH GSLGDGHFSY AEERGVALAP VAVYRRGADL
RAAVSQLLSK PHEYVLVDAE KGSGERFEGG LKIPLHVLAE VAHMGKVALA GGITPENAHL
VAALRPYMVD VASGVESSPG VKDPGKVKAL LRALGRLSG