Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1163 |
Symbol | |
ID | 6165453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 1055591 |
End bp | 1056400 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641668313 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001794538 |
Protein GI | 171185619 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1533] DNA repair photolyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000309895 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAGATAT ATGAGATCAG GGTGCGCCGC GCCCTAACCC CCTCCGGCCT ACCGGAGTAC CACTACGCCC TCAACCCCTA CGTCGGTTGC CTCCACGGCT GCCTCTACTG CTACGCCCAG GACTACACCA GGGGGCCGCC CGGCGCCGCC TGGGGCCAGA TCCTCTACGT GAAGGCCAAC CTCCTGGAGG TCCTCAGGCG GGAGGCCGCC CAGCTCAAGC CCGGCGTCGT GGGGCTCTCC ACCGTGACAG ATCCCTACCA GCCCCCCGAG GCCAAATACA GGCTGGCCAG AGGCTCCATC GAGATACTGG CGGAGGCGGG CTTCCACATC TCGGTCCAGA CCAAATCCCC CCTCGTGCTG AGGGACCTAG ACCTCCTCAG GAGATACAGG GAGTCGGTAG ACGTGGGCAT CACCATCACC GCCATGGGAG ACAAAGCCCT GGAGTTGGAG CCCGCCGCCC CGCACCCCAC AGCCAGGGCA AGAGCCGCCG CGAGGCTCGC CGAGGAGGGG GTAAAGGTGT GGATATACCT AGGCCCAGTG GTGCCGGGCT ACAACGACAG CCGGCAGGAC ATCGCAGAGG TTGTAAAACT CGCCGCCTCC ATAGGCGCCG AGCTCATATA CGACAGATAC AGGCCCAAGC CCAGAGCCCA CGCGAGGCTA CCCCCCGCCT ACAGACAAGA AGCCGGCAGA CAGTGGTGGA CACAGGTAAA GAAAACAATA GAAGAGCTCT GTAGAGAGGC CGGGGCGAGG TGCCTAGACG TGGAAGAGGA GTGGAGAGCC AGACGCGACC TCCCTCAGAA GCCGGGCTAG
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Protein sequence | MKIYEIRVRR ALTPSGLPEY HYALNPYVGC LHGCLYCYAQ DYTRGPPGAA WGQILYVKAN LLEVLRREAA QLKPGVVGLS TVTDPYQPPE AKYRLARGSI EILAEAGFHI SVQTKSPLVL RDLDLLRRYR ESVDVGITIT AMGDKALELE PAAPHPTARA RAAARLAEEG VKVWIYLGPV VPGYNDSRQD IAEVVKLAAS IGAELIYDRY RPKPRAHARL PPAYRQEAGR QWWTQVKKTI EELCREAGAR CLDVEEEWRA RRDLPQKPG
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