| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1151 |
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| Symbol | |
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| ID | 6166027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 1042324 |
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| End bp | 1043313 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641668302 |
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| Product | CRISPR-associated RAMP Csm5 family protein |
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| Protein accession | YP_001794527 |
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| Protein GI | 171185608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01899] CRISPR-associated RAMP protein, Csm5 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.016955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000243621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAGGC TGTCTGCGGC AGGTGGGCCC CTCGCCGGCT GGGAGACCGC CGTTTTGAGG
CTTAGGGCTG AGACTCCGGT CTTTGTGCTG TCGGGGAGGG CGGCGGTGGT GGGCCTGGAC
GCCCTGTGGT CCGGGGGGCG GCTCCACGTC CTCGACTTGG AGCACCCGGC GCTGCTCCGG
CTAATCGAGG CGCAGGTGAG GGCGGGGAGG GCGCCCTCTC TGGCGGATGT GGTGGCCGCG
GCTAGGGCGG ACCCCGCGCG GTACTCCCGC CTCTCTCTGC CGTCGCCCCA GCTCCCCGAC
AAGGCGGAGG TAAAGTTGGG GATCCCGCCT CCGGCCTCCA CGGTCAAGGG GATGTTGCGG
ACGGCGTATC TCCACTGGGT TCTCAAGAGG GATGGGGAGG CTAGGGGGAG GTTCCTCAGC
GCGGTGGCTC AAGCCCTGGA GGAGCGGGTC CACCCGAAGT TCCTGGCGGC TAGGGGCGAG
GCGGCCGTCT TCAAGGTGGT GGTGGGGAAG AGGGTCTGGG ACGTCTTCAA CGCTGTTTTG
GTGAGGGAGG GGCCCGCCGG CGCGAGGTTT GAGGTGTACA AAATCGACGT GGTGAAGGGG
AGCAACGTCA TAGCTTCGGC GTATGCGGTG GGCGCGTCCC CGGGCTCCGC CTTCGAATAC
AGGGTGGTCG TTAGGCCGAG GCCTAGGGAG GACGGCGGGG GCGACGCGGT CCTCGCCCTG
GACGACTTGA AAAAAGCTCT GGACGACTTC GCCCGCGAGG CGGGGGAGAG GGAGGGTTGG
AGGCCCCGGT GCCCCGCCGC GGTGAGGATC GGCTTTGGGG CGGGGAGGAG GTGGAAGACC
GTGTTGAACC TGGTGGAGCG GCACGACCCA GCCCTCTACC GGAGGATACA GGAGTACATG
ACCCAGCGGC TTAAGAGGTT CTGGGGGGAC GTGACAAAGA AGACGGTTGA GGGGATGCCG
GTGGGCTGGG CCTGCTATGA GTGGCTATAG
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| Protein sequence | MSRLSAAGGP LAGWETAVLR LRAETPVFVL SGRAAVVGLD ALWSGGRLHV LDLEHPALLR
LIEAQVRAGR APSLADVVAA ARADPARYSR LSLPSPQLPD KAEVKLGIPP PASTVKGMLR
TAYLHWVLKR DGEARGRFLS AVAQALEERV HPKFLAARGE AAVFKVVVGK RVWDVFNAVL
VREGPAGARF EVYKIDVVKG SNVIASAYAV GASPGSAFEY RVVVRPRPRE DGGGDAVLAL
DDLKKALDDF AREAGEREGW RPRCPAAVRI GFGAGRRWKT VLNLVERHDP ALYRRIQEYM
TQRLKRFWGD VTKKTVEGMP VGWACYEWL
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