| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_1022 |
|---|
| Symbol | |
|---|
| ID | 6164902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | + |
|---|
| Start bp | 913321 |
|---|
| End bp | 914796 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641668174 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001794399 |
|---|
| Protein GI | 171185480 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00890016 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTCC TCAAACTGGT GTACTATCAA GTGAAGCAGT TGTACTCCAA GTGGTTCCCG
ATCGTCTACG CCGTGATAGC GGCAAGCGTT CTATTACCTT ATCTGGCCTT TCATTCGACT
GCGGGGGAGG CCGCGCAACA ACCCCCTATG GGCAGGTACA TACCGCTGGC GGTGATGGCT
TTGTTCACCC TTGTTGTGAC AATAGGCGGA ACATTCGCCG TTGCAAAGCA AGACGTAGAC
TTCACCTTCG CTGCTCCGAT CGACCCCAAA CAGATATTTT TAGCGAGGGT CATAGCCCAG
GCCCTCATCA AAATCGGATT TCTATTGCTC GTTACATTGC CACTCTCCTC GCTGGAGGGG
CCCTACGATG TAGCCCTCTA TCTGGCCACT CTGTGGTCGT CAGGCCTCCT GTTTAGCGCC
GCGGAGTTGA GCGCGCTCCT CTCGGGGAAG GTCCAGCGCT TCCTCTACAT CGGCGTCCCC
ATAGCCTTAA TCGCGCTGTT GTTCATAGAC CCTCAGATCA CCCCCCTCTA CGGCCTCTTC
CGCCCATCGC CCCTCAGAGC CCTTGAGGCG GTCGCCTTGG CTACGGCGTA TCTGGCGGCC
GCGCCCTACA AGAGGGTCGA GGAGCTGTCC ACGAACGTCT ACGGCGTGCT CACCTGGACG
CCCCAGCCGC GCATAATTGA GAGACCCTCG GCCCTCCCCC ACACCCTCTG GGGAGTGATC
TGGCACACAT CCGTCGGGTC GACTGTGAAC ATACGCCTTA AAACGCCTGG CAGCGTTACG
ACCGTCCGGC AGACTAGGAC GAACGTCTTC AAGTCCTCTC TGCCCATAGT GGCGGCAGTA
GCCGCAGTAT ACACATTCAT CGTCCTACAC GTGAGCGGGA CCGACGAGGT AGAGTTTACG
TCCATCGTTG GCTTTTTGCT CCTCTTTAAT GGCTTCACCT CCGGCTTCAC AACGCTGATG
GCCGAGAGGC TCTGGATAAG TTTGGCGGCG GATCCCATAA GGTATTTACG CTACAGAATG
GCCGCCAGAA CGATCATAGC GGCCGTGTTG TACGCGCCCT GGGCCGCGGC GTTTTTGATC
CAGAGCGCGG TCTTTCCGCC GTCCGTCTTT TTGGATGTCG CCCTGGCGTC GGCCGTATTG
GTTCTGCCCA GCGCCACTTG GCTTCTGGCC TCCGTAAAGC CGCCTCCGCA GATCAGGGAG
CTGGGCGTAG TTCAGGCGCC GCAGAGGCTC TCGCTCTGGA ACCTCCTACA GGTCCTCGCG
GCGTCCCTCT ACATCTCCTT TGCCCTGTTT CCCTACGCGC TGGCGGTTGT TGCTTACTTC
CTCAAGCTGG AGTTCCTCTG GCAGATAGCC CTGATAGACG CGGCCGTCGT GCTGTCCCTC
TCGGCGGCCT TCTTCTACGT CGTGGTTTTG TCCGAGAGGG GGGCTCCGCT GTGGAGCTGG
GCTGTGAGCA AGCTGTCGGA GAACGGCTAC GTGTGA
|
|---|
| Protein sequence | MRFLKLVYYQ VKQLYSKWFP IVYAVIAASV LLPYLAFHST AGEAAQQPPM GRYIPLAVMA
LFTLVVTIGG TFAVAKQDVD FTFAAPIDPK QIFLARVIAQ ALIKIGFLLL VTLPLSSLEG
PYDVALYLAT LWSSGLLFSA AELSALLSGK VQRFLYIGVP IALIALLFID PQITPLYGLF
RPSPLRALEA VALATAYLAA APYKRVEELS TNVYGVLTWT PQPRIIERPS ALPHTLWGVI
WHTSVGSTVN IRLKTPGSVT TVRQTRTNVF KSSLPIVAAV AAVYTFIVLH VSGTDEVEFT
SIVGFLLLFN GFTSGFTTLM AERLWISLAA DPIRYLRYRM AARTIIAAVL YAPWAAAFLI
QSAVFPPSVF LDVALASAVL VLPSATWLLA SVKPPPQIRE LGVVQAPQRL SLWNLLQVLA
ASLYISFALF PYALAVVAYF LKLEFLWQIA LIDAAVVLSL SAAFFYVVVL SERGAPLWSW
AVSKLSENGY V
|
|---|
| |