Gene Tneu_0934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0934 
Symbol 
ID6164355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp827985 
End bp828902 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content69% 
IMG OID641668091 
Producthypothetical protein 
Protein accessionYP_001794317 
Protein GI171185398 
COG category[R] General function prediction only 
COG ID[COG2248] Predicted hydrolase (metallo-beta-lactamase superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00193812 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTT CCCCGGTGGG AGAGGAGTCC CTCGGGGTTA GGTCGATGTG TTTCTACGTC 
GAGACCCGCG ACGTTAGGAT ACTCTTCGAC GCGGGGGTGT CCCTAGCGCC GAGGCGCTTC
GGGCTGCCGC CGCACCCCCG GGAGCTGGAG AGGGCCCGGG CTGTGAGGGC GGAGATACTG
CGGCTTGCGG AGGCCGCAGA CGTGGTCACA GTCAGCCACT ACCACCGAGA CCACTTCACC
CCCTGGTACC CCAGCGTCTA CATGGCCACA GACGGCGAGA TGTACAAGAG GGTGTACGGG
GGGAAGAGGG TCCTCCTGAA GAGCCCCCAG GACCTGAACT GGTCCCAGAG GAGGAGGCAC
TACGGCCTAT CCAAGGCCCT ACGGGAGGCG GGGGCGGAGG CGGTTTACGC AGACGGAGGC
GAGTGGGCCT TCGGGGGGAC GAGGGTCGCC GCCTCCCCGC CCCTCTGGCA CGGCCCCGCC
GGGTCGAAGA CGGGGCGCGT CCTCGGCTTC GCCGTCAGCG ATGGGGAGGA GAGGCTCGTG
TTTCTCCCAG ACGTGGAGGG GCCTCTGGAG CCGGAGCCCA TCGCCTTCGC CAGGGGGGCG
AGGCCCACCG TGGTCGTCGT CGGGGGACCG CCCACCTACC TCGGCTGGGA TCTCGAGAAG
GCGGTTAAAA ACCTGGCGGA GCTCGTGGAG CTGAGGCCCC ACACCCTAGT CCTCGCCCAC
CACCTCCTCC GGGACGTTCA GTGGAGGGAG AAGGTGGCGC CCCTTTTTGA GCTGGCCGAG
AGGAGGGGGG TGGTGGTGGC CACCTACGCC AGCCTCGCCG GGAGGCCCGA GGAGCTTCTG
GAGGCCAGGA GGAGGGAGCT CTACGCCGAG GAGCCCGCCG CGGTTGCGGA GGCGGGGGAG
GGTGAAGAGG AGGACTAG
 
Protein sequence
MDFSPVGEES LGVRSMCFYV ETRDVRILFD AGVSLAPRRF GLPPHPRELE RARAVRAEIL 
RLAEAADVVT VSHYHRDHFT PWYPSVYMAT DGEMYKRVYG GKRVLLKSPQ DLNWSQRRRH
YGLSKALREA GAEAVYADGG EWAFGGTRVA ASPPLWHGPA GSKTGRVLGF AVSDGEERLV
FLPDVEGPLE PEPIAFARGA RPTVVVVGGP PTYLGWDLEK AVKNLAELVE LRPHTLVLAH
HLLRDVQWRE KVAPLFELAE RRGVVVATYA SLAGRPEELL EARRRELYAE EPAAVAEAGE
GEEED