Gene Tneu_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0885 
Symbol 
ID6164285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp788341 
End bp789228 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID641668041 
Productpeptidase M48 Ste24p 
Protein accessionYP_001794268 
Protein GI171185349 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCTAG ACCTGTTGGA CTTTCTACGT AGGAGATACA GGGGCGACGC CTACAAGGCA 
GCTCTTGTGG GCACCTACGT AGGGGGGAGG TATGTCGACC CGCCGCCTCT CCAGGCCAAC
GCCTACCTCC TCATGGTGCC GCTGGCCTTG TCGCTGGTGC CGCTCCTCCT CTCGAAGAAC
GCGGCGCTCC AGTGGGCGGC GGGGGTGGCC ATAATAGTTG GGGCCTACCT AGCCCTCTAC
CTCTACCTGA GGAGGAGCTG CTTTATCCCA GACGAGGTGA GGGTGGTGAG GACGAACTAC
GGAGACGTGG ACTACCTGAG GAGGAACAAG CTAGCAATTC TGGAGGACCC CTCCGCCCTG
CCTGGAGACT ACGAGGTCTA CCACGCCCCG GCGGGGGTCT GCGTGGCTAG AGATAGGAGG
GCAAACGCCT TCACGTTGGA CGGCCCCGGA GGGCCCGTCA TATTCTTCAC CACCGGCCTA
TACGCTAGGC TAGAGCCCGA GGAGCTACAG GCGGTTCTGG AACACGAGCG GGGCCACATA
CGGTATAGAC ACACCCACAA GCTCCTCGCC TTCCTCATCG CCGAGTACAC CCTCAGAGTG
CCGCTGGTCC ACCTGGTGTA TACGAAATAC ACGGTGGCGT TGCTCGCCGC GCATATGGTG
GGCGCGGCGC TCCTCTTCAC AGCCCTCCTC CACGCCTTTG AGTTCGAGGC GGATAGATAC
GCCGCGGCGA AACACAGAGA GCGCCTCGCC TCCGCGCTGG TTAAGCTGGA CTGGAACGGG
ATCGTGGACT CCGTGGCGAA CCCCATCGCC GCTAGGCTGT CGTTGCTGGC CCGCTCCCAC
CCCCTCACCA TCGACAGGCT GAAGAGGCTC AATGCGCTTC CTCACTAG
 
Protein sequence
MGLDLLDFLR RRYRGDAYKA ALVGTYVGGR YVDPPPLQAN AYLLMVPLAL SLVPLLLSKN 
AALQWAAGVA IIVGAYLALY LYLRRSCFIP DEVRVVRTNY GDVDYLRRNK LAILEDPSAL
PGDYEVYHAP AGVCVARDRR ANAFTLDGPG GPVIFFTTGL YARLEPEELQ AVLEHERGHI
RYRHTHKLLA FLIAEYTLRV PLVHLVYTKY TVALLAAHMV GAALLFTALL HAFEFEADRY
AAAKHRERLA SALVKLDWNG IVDSVANPIA ARLSLLARSH PLTIDRLKRL NALPH