| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0543 |
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| Symbol | |
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| ID | 6166175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermoproteus neutrophilus V24Sta |
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| Kingdom | Archaea |
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| Replicon accession | NC_010525 |
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| Strand | + |
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| Start bp | 495922 |
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| End bp | 496899 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641667696 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001793932 |
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| Protein GI | 171185013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.979226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000989319 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGGGGGA AGAGAGTTGC CGCAATAGCC CTATCTAAGC TGGTACTAAT CGCGATCGTA
GCAGTAAACA TATACTACGG CGCCAAGGTA ATCCTCCCCA TCGTCGGACT CGGGCTAAGC
CAGGAGCAGC TGGACCTACT GAAGTCCGCC ATTTTGATAG TCGCGGGGGG ACTCGGCGTA
AACGTCTTGG GCAACGCCGT AGTTCTATAC CTCAGGGATA ACCTCAGGGA GAAGGCGTTC
GCCGTCGGCA ACGTCATAAA GATCGTCGGC ATAATAGCCG TAGTGCTATA CGCGGTATCG
ATCTCAAAAC TAGGCGCCGA GCTGGCTCTA CTGGGCGGCA CAGTCACGGG CCTGGTGCTG
GGTCTCGCCC TACAGCCCAT CCTTGGAAAC GTCTTCGCAG GGATTTTGAT ACTCACCACG
AGGTTTGTGG AGGTGGGGGA CACGGTGAGG ATAGTGACCT CCCAGCTACC ATACAAGGTG
TCGGATCTGC CGCCCTACAA ATACTTCTCG CCAGACTACG TGGTGCCGGG CTTCAAGGGC
AAGGTCGCGG AGATAGGGCT TCTCTACTCG ACGCTGCTCC TCGACATGGG CCACGAGCTG
AAGGTGCCCA ACATGGTTCT CCTCAGCTCA GCCGTCGTCG ATTACACCCC GCGGTGGACG
GAGAAGCAGG TGGTGTACAT CAGGGTGGAG CTCCCCATCT CCGTGATAGA CCTCGACAGG
TTAGAGGAGG AGATTAGGTC TGTGCTCAAG GGCTTCAACG TCGTGGCGGT GGACTACACA
GAACAGAGCG ACAAGGACCA CGTCATAGTG AGAGTTAAGC TCGAGGTTCC ACACGGCGAG
AACTGGAGGA GGGCTAAGAG CGAGGCCCTC AAGCTCCTCC TCCGCTATAG AAACGAGAGG
ATCGAGGCGA ATCTGCCGCG GTACCTCTGC CTCACCAGGG GCATCCTCTG CGATAGATAC
GCCCAGGGCA GGCCCTAG
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| Protein sequence | MRGKRVAAIA LSKLVLIAIV AVNIYYGAKV ILPIVGLGLS QEQLDLLKSA ILIVAGGLGV
NVLGNAVVLY LRDNLREKAF AVGNVIKIVG IIAVVLYAVS ISKLGAELAL LGGTVTGLVL
GLALQPILGN VFAGILILTT RFVEVGDTVR IVTSQLPYKV SDLPPYKYFS PDYVVPGFKG
KVAEIGLLYS TLLLDMGHEL KVPNMVLLSS AVVDYTPRWT EKQVVYIRVE LPISVIDLDR
LEEEIRSVLK GFNVVAVDYT EQSDKDHVIV RVKLEVPHGE NWRRAKSEAL KLLLRYRNER
IEANLPRYLC LTRGILCDRY AQGRP
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