Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_0484 |
Symbol | |
ID | 6165954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | - |
Start bp | 440974 |
End bp | 442068 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641667641 |
Product | glycosyl transferase family protein |
Protein accession | YP_001793877 |
Protein GI | 171184958 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0461685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000461867 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAT CTATGGCCAT ATTTGTTGTA AATTATAATT CAGTGTCAAC TATGGGCCAG AGGGTATTCA ATTTTCTTGA TACATTTGTA GATGTCGTGG ACCAGGACGT AGATGTGTGG CTAGTTGATA ATGGGTCAAC TGACGGATCT TACAGCGTAC TTTCGCAACG CTACGGCGGG ATGCTGAAGT TCTTGGCCCT CCCTAAGAAT CTCGGCTACG GGGCCGCGTG TAGCCTCGCC TACAGATATA CAAGATTAAT GGGGCTGGAG TACGACTATT ACGTCTGTAG CAATAACGAT ATTGAGCTCT TTCCCCAAAA GATCGGCGAA CTGCTCTCCT ATCTCAGAGC GCTGGAGAAG GCCTATCCCA AGGGGTTCAT TGCGGCGCCG TTGCTATTAA ACGGAAACGA TGGGCTAATA GATTACGGTG GATACTTCAT CGACGACAGT GGAGGAACTT GGGGCCTGCG CCTGGCGGCT TTAACTCCAC GGGAAATACG CCGCCTCACT CCGATCAGTT ATGCAGATGG GGCGTTTCAG ATAGTACATA GAAATGTTGT TGAGACTATA GGTTGGTTTG ACCCCAAGTA TTTCTTGTAT TACGAAGATG TGGAGTTTTC TCTGAGGGCG TGGAGGGCGA GATTTCCTTC TCTTCTTATA CCTCTAGTGA TCGGCAGACA CTACCGAAGT GCTAGCACGG GTAGATCAGT CTATAAGGTG ACATTTCTGT CCTATAGGAA TAGACTACTT ATCATAAGAG AGTACTTGGG CGCATTACCG CTTCTAAAAT TTCTGCTCTG GATAGTCTCC TATCCTCTTC GGGTTTTCGA CCAGAAGATC TCGGCTTTAG ATAGATATAT AGAAATTACC GCTCCAGGTG TACCTACGCC GAGGTGGGGC ATTAGGGAGT ACCTTGAGGT TCTGAGACAT CTAGTCAGAG CTCTATACGA GGGATTTACC GCCTCCGTTG GTAGCAGAAG AGCAGGGGGG GTCCCTGTAG TAAAAACTTC ATGGATGAAA TATCTGTCCA TGAAAAGCTT GCTTAATGAC GTTAGATCAG AAATTACAAG AGTGACTAAG GATGTTGAGG GCTGA
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Protein sequence | MKKSMAIFVV NYNSVSTMGQ RVFNFLDTFV DVVDQDVDVW LVDNGSTDGS YSVLSQRYGG MLKFLALPKN LGYGAACSLA YRYTRLMGLE YDYYVCSNND IELFPQKIGE LLSYLRALEK AYPKGFIAAP LLLNGNDGLI DYGGYFIDDS GGTWGLRLAA LTPREIRRLT PISYADGAFQ IVHRNVVETI GWFDPKYFLY YEDVEFSLRA WRARFPSLLI PLVIGRHYRS ASTGRSVYKV TFLSYRNRLL IIREYLGALP LLKFLLWIVS YPLRVFDQKI SALDRYIEIT APGVPTPRWG IREYLEVLRH LVRALYEGFT ASVGSRRAGG VPVVKTSWMK YLSMKSLLND VRSEITRVTK DVEG
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