Gene Tneu_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0390 
Symbol 
ID6164896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp354490 
End bp355242 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content61% 
IMG OID641667548 
ProductABC transporter related 
Protein accessionYP_001793784 
Protein GI171184865 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.10472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGTA TTAGGATAGA GGGGGTTGAG TTCAGCTATC CCTCGCGGCA GGCGCTTAGG 
GGGGTCACCG TGGAAATCCC GCCGAGGTCT TTTACGGCGG TGCTTGGGCC AAACGGGGCT
GGGAAAAGCA CCCTCATGAA GATCATGGCG TCTGTCCTAA AGCCCAGGAG GGGGGCGGTG
TACTTCGACG GGAGGATTCC GCGGAGGGAG GAGCTGTATA GGACGGTGGG CTACGTCCCG
CAGAGGGCCG CCCCAGGAGG CCGGCTGAGG GTTATCGACC TGGTGGTGAG CTCTAGGAAG
CCCTACTTCC GCTTCTTCCC CACCGCCGGG GACTACAGAG CCGCCGAGGA GGCCCTCAAG
CGCGTTGGGG TTAGCCACCT AAGGGATAGG TTTCTGGAGG AGCTGAGCGG CGGCGAGTTC
CAGCTGGTCC TCCTGGCTAG GGCACTCGCG GTGGAGCCGA GGGTCCTCCT GCTGGATGAG
CCCTTCAACA ACCTAGATCT GAGACATCAG CTGGAGGTGG CCTCGCTGTT GAGGAAGCTC
TCCAGCGACG TCACCGTGGT GGCTGTTCTA CACGATTTAA ACATGGCACT GAGGTACGCC
GACTACGCCA TATTTATGTC CCGCGGGGAG GTATACGCCG CGGGGCCTAC CAAAGCCGTC
TTTAGAGAAG ACGTCATATA CGACGTCTAC GGCGTCAAGA CGAAAATACT TTGGGAAATC
CCCGCCGTCA TCCCCCAGCA ACCGCCGGGA TAA
 
Protein sequence
MVSIRIEGVE FSYPSRQALR GVTVEIPPRS FTAVLGPNGA GKSTLMKIMA SVLKPRRGAV 
YFDGRIPRRE ELYRTVGYVP QRAAPGGRLR VIDLVVSSRK PYFRFFPTAG DYRAAEEALK
RVGVSHLRDR FLEELSGGEF QLVLLARALA VEPRVLLLDE PFNNLDLRHQ LEVASLLRKL
SSDVTVVAVL HDLNMALRYA DYAIFMSRGE VYAAGPTKAV FREDVIYDVY GVKTKILWEI
PAVIPQQPPG