| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tneu_0229 |
|---|
| Symbol | |
|---|
| ID | 6164374 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermoproteus neutrophilus V24Sta |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_010525 |
|---|
| Strand | - |
|---|
| Start bp | 204353 |
|---|
| End bp | 204901 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641667393 |
|---|
| Product | PaREP1 family protein |
|---|
| Protein accession | YP_001793629 |
|---|
| Protein GI | 171184710 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.529373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATGG AAGTATTAGA GAGGCCCTTA CCCAAACCCT CCGCCGAGGA CTATGTGAAT
GTCCGGCTCC TTGAGGCGCT TGTGGAGGCG GGCCTTGCCC TTGAGTACCT AAGACGAGGC
CTCGTCAGAA ACGCCGCGGG GAAGGCTTTT CAAGCTTGGA AAGCGCTGAT GGCGGCTCTG
CTAAGGCTTG AGCTGGATAA GCTTAAGAAC ATCGCCAAGA CTGGCGAGGA AAGGAGGTGG
CTTGAGTCCA CCGCGGTGCC TAGGGTGCCC ACCAGCAGAA TGACTTCACT GTCGCAGACG
TTGGAGGACG TGGGCCATGT AGGCGTATCT GCGTGGACAG CGATGGCGCT TAAGCTACAC
GACTACCAGT ACCACGGCCC AGATCCCGAC ATGGCTCTAT CAAAATACCG CACAAGAGAA
GAAGCCGCAA AAGACGTGAT CTTACTATTG AGAGAGCTTG TGGAGAGGGT CGAGGCGATA
AGAAACAGAG TGAGGTGGAG CCCAGAGCTT GAAAAAACGC TCCAGACGTT GAAGAAGGAG
GTAGCCTAA
|
|---|
| Protein sequence | MDMEVLERPL PKPSAEDYVN VRLLEALVEA GLALEYLRRG LVRNAAGKAF QAWKALMAAL
LRLELDKLKN IAKTGEERRW LESTAVPRVP TSRMTSLSQT LEDVGHVGVS AWTAMALKLH
DYQYHGPDPD MALSKYRTRE EAAKDVILLL RELVERVEAI RNRVRWSPEL EKTLQTLKKE
VA
|
|---|
| |