Gene Tneu_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0180 
Symbol 
ID6164650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp158966 
End bp160846 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content61% 
IMG OID641667345 
Producthypothetical protein 
Protein accessionYP_001793582 
Protein GI171184663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0914907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAA CGATCCTACT TACGCTGGGG TTGGCCGCTC TGATGTTGGC GGCCACCACG 
GTGGTTATAC CTCCAACCGC AAAACTGGAG CAGATAGCGT ACAAGGTGGA GGAGACCACG
CTGAAGATAC AGGGCGCCGG CGTGGCGACG CTGGCGAGAC CGTACGTCAC GCCCGGCGAG
GGCTACGTAT ACGCGGGCAT GAAGATAGAG TTCCTCGGCG CATACCCCTC CATACAGGTG
GGAGCCGACG GCCAGATAAG CAAGACCTTT GACCAAAACG GCTTCGTGTC CGCGGTGTAT
GTCGGCCCCG ACGCCTCCAA GGTCACCCTG GTCAACACCG CTAAGGATCA GGTGGAGGTG
AAGGTGAGGA TCACCTACAC CTACGTCAAG GCGAGCTACA TCCCGCTCAA CGGAGACACC
ACCCTTGAGG TCAACGTCCC AGACGGCAAG CTTGCCCAGG GCTTCAACGC CATGGCTAGG
CTCACCATCG AGCCCTACGC CTCCTACGTC GTAAAGTCCG TGGAGAGGCC CGACGGCACC
CCCGCCACTG TCTACAGGGT TGAGCCTAAG GTGGTGGAGA TAAACACCCC GGGCAAGTAC
AAGATAGTCA TCGGCCAGGG CCCGGCGATG CCCGCCGCTA TGTTGGTCAA AAGCCTCTCT
AAGCAGACCG CCTCCGTGGC GCCCAACGGA GAGTTCGCCG TATCCGGCGC AGAGGTGGGC
GTCCCCCAGG GCTGGAAGCT ACTCGGCTAC GTGGTGTTCG CATACACAGC CGACGCCAAC
CTAATCGGCA AGGAGGTGAC CGGCGACATC GCCATCTCCG GCGGCTTGGT GGACACCGTG
ACGGACGTCA ACCAGAACAT CATAGTTAGG AGCGTCTCGT ACCTAATACC GCCCGTCTGG
AACTTCAACA TCAGGTACAA GATCGCGATA GTCTACGGCG AGGGCTTCAA GATAACCTCC
ACGCTGCCCA GCACCGTCAA CGTGATATAC ATACCCATCG TGTACAAGGA GGCCCAGGTC
AAGTGGTTGC CCGACAGAGC TCTGGTCAAC GTGACCGACG CCGACGTGGC AGACGGCCAG
TGGACTGCCA TAGTGATGCA GCTACCCGAG CTGGCAAGGA TAGTGGCCAT TAGAACCCCC
GGCAACGCCA TGATATCAAA CGCCACAGAT GTCAAGCTGG TGTGGGGCGG CGGTCTGAGG
GCGGCCTCCA TATCGCCCGA CGGGAGGCAG GCCTACCTAG TGGTGCAGAT GGGAGACACC
AAGGAGGTCG GCACCTACAC CTTCATAATC AACTGGAGGC CCATGAGGAT ACCTGTGGTA
GACACCAAGG GCCGTCCCGT GTCGCAGCTC TCCGCCACCT CCGACAAGTT CGAGGCGGCT
GCCTCCACCG GCTACGTGGA GGTGAAGGTC TACAAGCCCG AGCCCTTCGC CCTAGACATC
AGCTACAGGG GCGTCAAGGC GGCTCACGTC GAGGTGAACT CCCTAATCGC CAGCCCGCAG
CCGGTGACTT TGGGCATATA CACCGTCAAG ATAGTGGTGG TCGGCGCCTT GAACCAGCCG
ATAGCGGAGG CGTCGGTGGC CATCGAGGGC TTCCCGGCCT CCGGCAAAAC CGACAGCTCC
GGCGCTGTGA AGTTCCCAGA CGTGCTGGCC GGCACGTACA AGGTTAACGT CGACGTCGGA
GGTAGGGTCA AGGTGAGCGA CACTATCGAC GTCAACGGAG ACGTGGAGAA GGTCATAAAG
ACTCCGATAG TGGCCGTGGT AGGGGGCGTG CCGATAACCA CGCTAGACGC CATCGCAACC
GTCGGTGGAC TCTCCGCGGC TGGGCTGTAC TTCGCGATTA AGAGGAGAGG AGAGCCGGTA
GCCGAAGTGG AACAGATTTA A
 
Protein sequence
MTRTILLTLG LAALMLAATT VVIPPTAKLE QIAYKVEETT LKIQGAGVAT LARPYVTPGE 
GYVYAGMKIE FLGAYPSIQV GADGQISKTF DQNGFVSAVY VGPDASKVTL VNTAKDQVEV
KVRITYTYVK ASYIPLNGDT TLEVNVPDGK LAQGFNAMAR LTIEPYASYV VKSVERPDGT
PATVYRVEPK VVEINTPGKY KIVIGQGPAM PAAMLVKSLS KQTASVAPNG EFAVSGAEVG
VPQGWKLLGY VVFAYTADAN LIGKEVTGDI AISGGLVDTV TDVNQNIIVR SVSYLIPPVW
NFNIRYKIAI VYGEGFKITS TLPSTVNVIY IPIVYKEAQV KWLPDRALVN VTDADVADGQ
WTAIVMQLPE LARIVAIRTP GNAMISNATD VKLVWGGGLR AASISPDGRQ AYLVVQMGDT
KEVGTYTFII NWRPMRIPVV DTKGRPVSQL SATSDKFEAA ASTGYVEVKV YKPEPFALDI
SYRGVKAAHV EVNSLIASPQ PVTLGIYTVK IVVVGALNQP IAEASVAIEG FPASGKTDSS
GAVKFPDVLA GTYKVNVDVG GRVKVSDTID VNGDVEKVIK TPIVAVVGGV PITTLDAIAT
VGGLSAAGLY FAIKRRGEPV AEVEQI