Gene Tneu_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_0127 
Symbol 
ID6165768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp113964 
End bp114773 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID641667293 
Producthypothetical protein 
Protein accessionYP_001793530 
Protein GI171184611 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0384146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00530729 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATAACGG TTGGCGTTTT AGACGGGGTG CCGCGGCGGG TGGTGAGCCT TAACCCCTCG 
GTCAACGAGT TTCTGGCTCT CCTCGGCGTG GAGCTGGCGG GCCGGGACGC CTTTTCCTAC
AGGCCTGCGG AGCTCATGTC TGTGCCCATC GTCGGCACCT TCGTCGATGT CGACCGGGAG
GCTCTCTCCA AGTTACGGCC GGATCTCGCC ATATTGTACT ACCCAGTGCA GAGGCACCTC
CTCGACGCCG TGGCCAACGC GTCGAAGGCC GTTGTCGCCG TCCCTACGCC GACCAGCGTA
GACCACGCCG TGGCGGTCTT CAGGTTCTTC GCCAGGGTTT TCGACAGAGA CGAGGAGGGG
GATAGAATAG CCGGCATATA CCGCGATCTG CTGAGGGGCG CCCCCCTCTA CGACGAGGTG
GTGGCGGTCA TAAACCTCGG CGTCTACGAC CTGGCGTGCT CCAACTCCTA CGTCGCAGAC
GCGCTGACGC GGGTGGGGCT GAGGTACGTG AGGGGGTTCC CCTGCGTGTT TAAACACAGC
GAGTCGCCGC CCCAGGAGGC GCTCAGCCGG GCCCACTTCG TCGTCTACGA GGCCAGGGGG
AAGAACTACT ACGAGAAGGA GACGCAGTTC CTAGGCGGCA AGCCCCACGT GGTCACCCCC
AACGACACCC TGGCCCACTA CGGCCCCTCC CTCCCCCTGG ACCTCCGCCT CGTCGCAGAG
GCCGTAGCTA GGGGGGCTAG GTGGGTCGGC GGCACCTCAA GCGCTGTGCG ACCCACGCTG
AGGGGCGGGT GGTACGCCCC GTATAGATGA
 
Protein sequence
MITVGVLDGV PRRVVSLNPS VNEFLALLGV ELAGRDAFSY RPAELMSVPI VGTFVDVDRE 
ALSKLRPDLA ILYYPVQRHL LDAVANASKA VVAVPTPTSV DHAVAVFRFF ARVFDRDEEG
DRIAGIYRDL LRGAPLYDEV VAVINLGVYD LACSNSYVAD ALTRVGLRYV RGFPCVFKHS
ESPPQEALSR AHFVVYEARG KNYYEKETQF LGGKPHVVTP NDTLAHYGPS LPLDLRLVAE
AVARGARWVG GTSSAVRPTL RGGWYAPYR