| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_4087 |
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| Symbol | |
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| ID | 7873314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 4490475 |
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| End bp | 4491365 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643701018 |
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| Product | spermidine synthase |
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| Protein accession | YP_002891041 |
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| Protein GI | 237654727 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGAG CGTCCTGGTT TGCCGATCTG CCGAAGGATG TCCTCGCCGA GCTTCTCGGC
GAGGATGCCG GCTACTTTCT CCGTGGTGCG CGCCTGCTCG AGTCCGGCCG CTCCGAGTGG
CAAGACTACG AGGTTTGGGA AACGCCGCGC TTCGGCAAGC TCTTTCGCCT CGATGGCTGT
TTCATGACGT CGGAGCGCGA CGAGTTCCAC TACCATGAGA ACCTGATCCA CGTCCCCGGG
GTTGCCCATC CCGGCCTGCG CCGGGCGCTG CTCATCGGGG GAGGGGATGG CGGTTCGGCC
GAAGAGCTGC TCAAGTATCC GGGCATCGAG CGTATCGTGA TCGCCGAGCT CGACGCGAAG
GTGGTCGACA TCGCCCGGCG CTACCTCGAT GCCGTGCATC ATGGCGCCCT CGACGATCCC
CGCGTGGAGA TCCGCATCGG GGACGGGATG GCCCATGTGT GCGAGCATGC TCCCGCCACG
GGCGAGCGCT ACGACCTGAT CGTGCTCGAT CTGACCGACC CGATCGGGCC GGCGGAAGCG
CTCTACACCG CCGACTTCTT CGCAGCCTGC AAGGCCCTGC TGGCCGAGGG CGGGGCGCTG
ACGCTGCATA TCGGTACGCC GGTATTCCAG CCCGAGCGTG TGCGAGAGTT GCTCGCCCGC
CTGCGTCGGG TGTTTGCGCG GGTGCGGCCG TACTTCCTCT ACATTCCGCT CTATGGGAGC
CTCTGGGGCA TGGCCTGCGC GTCCGATACG CTCGACCCGG CTGCGCTCGA CGCGAACGAG
GTGGACCGCC GTCTTGCCGA GCGCGCCATC CGCGAACTGC AGCACTTCAA TGGTGCGGTA
CACTGTGCGC AGTTCGCCCT GCCCAATCAT CTGCGTGCCT TGCTGGCCTG A
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| Protein sequence | MSGASWFADL PKDVLAELLG EDAGYFLRGA RLLESGRSEW QDYEVWETPR FGKLFRLDGC
FMTSERDEFH YHENLIHVPG VAHPGLRRAL LIGGGDGGSA EELLKYPGIE RIVIAELDAK
VVDIARRYLD AVHHGALDDP RVEIRIGDGM AHVCEHAPAT GERYDLIVLD LTDPIGPAEA
LYTADFFAAC KALLAEGGAL TLHIGTPVFQ PERVRELLAR LRRVFARVRP YFLYIPLYGS
LWGMACASDT LDPAALDANE VDRRLAERAI RELQHFNGAV HCAQFALPNH LRALLA
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