| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3844 |
|---|
| Symbol | |
|---|
| ID | 7874086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 4238257 |
|---|
| End bp | 4239090 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643700786 |
|---|
| Product | 5,10-methylenetetrahydrofolate reductase |
|---|
| Protein accession | YP_002890810 |
|---|
| Protein GI | 237654496 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
|---|
| TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCCG AAATCTCCAT CGAGTTCTTC CCGCCCACCA CGGCCGAGGG CGCCGAGAAG
CTGCATGCCA CCCGGGAGAA GCTCGCCGCG CTCGAGCCGG CCTTCTTCTC GGTGACCTAC
GGCGCCGGCG GCTCCACCCG CGAGCGCACC TTCGCCACCG TGAAGGAGAT CGCCGCCGCC
GGCCACGAGG CCGCGCCACA CCTGTCCTGC GTGGGCTCGT CGCGCGACAG CATCCGCGAG
ATCCTGCAGG AATACGCCGC CGCCGGCATC CGCCGCATCG TCGCGCTGCG CGGCGATCTG
CCCTCGGGCG CCGGCGCGGC GGGCGAGTTC CGCTACGCCA GCGAGCTCGT CGAGTTCATC
CGCAGCGAGA CGGGCGACCG CTTCCGCATC GAGGTCGCAG CCTACCCCGA GTGGCACCCG
CAGGCGAAGA GCCCGAAGGA CGACCTCGCC GCCTTCAAGC GCAAGGTCGA GGCCGGCGCC
GACTCGGCGA TCACGCAGTA TTTCTACAAC CTCGACGCCT ACCTGAACTT CGTCGACGCG
GTGCGCAGGA TGGGCGTCGA CGTGCCGATC GTGCCCGGCA TCATGCCGAT CGGCAGCTTC
AGCAAGCTGG CGCGCTTCTC GGATGCCTGC GGCGCCGAGA TCCCGCGCTG GATGCGCAAG
ACCTTCGAGA GCTACGGCGA CGACAGCGAC GCGATCCGCG CCTTCGGCCT CGACGTGGTC
ACCCGGCTGT GCGAGAAGCT GCTCGCCGCG GGCGCGCCCG GCCTGCATTT CTACAGCATG
AACATGGCCG GCCCGACCAC CGAGATCTGC CGGCGGCTGG GGCTGACTGC CTGA
|
|---|
| Protein sequence | MKPEISIEFF PPTTAEGAEK LHATREKLAA LEPAFFSVTY GAGGSTRERT FATVKEIAAA
GHEAAPHLSC VGSSRDSIRE ILQEYAAAGI RRIVALRGDL PSGAGAAGEF RYASELVEFI
RSETGDRFRI EVAAYPEWHP QAKSPKDDLA AFKRKVEAGA DSAITQYFYN LDAYLNFVDA
VRRMGVDVPI VPGIMPIGSF SKLARFSDAC GAEIPRWMRK TFESYGDDSD AIRAFGLDVV
TRLCEKLLAA GAPGLHFYSM NMAGPTTEIC RRLGLTA
|
|---|
| |