| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3639 |
|---|
| Symbol | |
|---|
| ID | 7873144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3996747 |
|---|
| End bp | 3997703 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 643700580 |
|---|
| Product | Glutamate--tRNA ligase |
|---|
| Protein accession | YP_002890609 |
|---|
| Protein GI | 237654295 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.917927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGC CCCTCCCTTC CCCCTGCCCC GGTACAGGCC ACCCCGCCGC CCCCTGCGTC
GGTCGCTACG TCGGCCGCTT CGCCCCCTCG CCCAGCGGCG CGCTGCACTT CGGCTCGCTG
GTCGCCGCGG TCGGCAGCAT CCTGGATGCG CGCGCCCACG GCGGACGCTG GCTGCTGCGG
ATCGAGGATG TCGATACCCC GCGCACGGTC CCCGGCGCTG CCGAGGGCAT CCTCGCCACG
CTGGAACGCT TCGGCTTCGA ATGGGACGGC GCGGTCGTGC GCCAGAGCGA ACGCGGCGAC
GCCTACGCGG CCGCGCTCGC GCGCCTGTGC GCCGCCGGCC TCGCCTATCC CTGCGCCTGC
ACCCGACGCG AACTCGCCGA CCAGCCGCTC GCGCGCGACG GCTCGCGCCG CTACCCGGGC
ACCTGCCGCG GCGGCCTGCC GCCGGGGCGC GCGGGCCGCG CCTGGCGCGT GCGTGCGGAA
GGGGTGGTGC GTTTTTGCGA CGCGGTACAG GGCGAGCAGG AGATCGACCT CGCCGCCGAC
GCCGGCGACT ACGTGGTCAA GCGCGCCGAC GGGCTCTTCG CCTATCAGCT CGCCGTGGTG
GTGGACGACG CCGAGGCGGG CGTGACCCAC GTCGTGCGCG GCGCCGACCT GCTCGATTCG
ACCGCGCGTC AGATCCACCT GCTCGGCCTC CTCGGCCAGC CGGTGCCCGC CTACGCCCAC
CTGCCGCTGG CCACCAACGC CGCGGGCGAG AAGCTCTCCA AGCAGACCCT GGCGCGCGCG
ATCGACGCGC ATCCGCCGCA GGTCGCCCTG ATGGCCGCGC TGCGCTTTCT CGGCCACAAT
CCACCCGACA TGCTCGCCAC CGCGCCGCTT GCCGAAACGT GGGCGTGGGC GCGGGCCCAC
TGGTCGCTCG CCGCCGTGCC GCGCCGCCGC CAGGCGGTGG CCGACGGCTT CTCCTGA
|
|---|
| Protein sequence | MQQPLPSPCP GTGHPAAPCV GRYVGRFAPS PSGALHFGSL VAAVGSILDA RAHGGRWLLR
IEDVDTPRTV PGAAEGILAT LERFGFEWDG AVVRQSERGD AYAAALARLC AAGLAYPCAC
TRRELADQPL ARDGSRRYPG TCRGGLPPGR AGRAWRVRAE GVVRFCDAVQ GEQEIDLAAD
AGDYVVKRAD GLFAYQLAVV VDDAEAGVTH VVRGADLLDS TARQIHLLGL LGQPVPAYAH
LPLATNAAGE KLSKQTLARA IDAHPPQVAL MAALRFLGHN PPDMLATAPL AETWAWARAH
WSLAAVPRRR QAVADGFS
|
|---|
| |