Gene Tmz1t_3467 details

Gene Information

• Locus tag: Tmz1t_3467
• ID: 7872973
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: -
• Start bp: 3795697
• End bp: 3797709
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643700407
• Product: AMP-dependent synthetase and ligase
• Protein accession: YP_002890438
• Protein GI: 237654124
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR01217] acetoacetyl-CoA synthase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGAAC AACTCCTCGC CAACGGCTGC CGCTGGGAAG ACACCGGGCT CGCCCGCTTC 
ATCCGTGATT ACGGCCACGT CGATCTCGCC GGCCTGCAGG CCTGCGCCAC CGAGGAGCCG 
GAGCGCTTCT GGGCCGAGGT CGCCGAGGCG CTCGCCCTGC GCTGGACGCG CCCCTACCGC 
CGGGTGCTCG AGCGCAGCGC CGGGCCGGCG TGGCCGCGCT GGTTCGTCGG CGGTGAGCTC 
GATCTGTACG ACAACCTGAT CGGGCGCGTC GCGCGCGAAG ATCCCGAGCG CCTGGCGCTG 
TCGTGGGAGG GCGACGACGG CAGCACGCGG CGATACCGCT ACGTCGAACT CGATGAGGAG 
GCGCGCCGGC TCGCCACCGG GCTCGCCGAG CTGGGTATCG GGCGCGGCGA CCGGGTCGCG 
ATCTACCTGC CGATGGTGCC GGAGACGGCG GTCGTGTTGC TCGCCTGCGC CCGCCTCGGC 
GCCATCGCCA TGCCGCTGTT CTCGGGCTAC GGGGCCGACG CCGTGGCGAG CCGGTTGCAG 
GATGCGGGCG CGAAGCTGCT CGTGTGCGCC GACGCCTACC TGCGTCGCGG CCGGCGCGTC 
GACATGCTCG CCGAGGCGCG GCTTGCGGCC GCGCGCAGTG CCGCGGTCGC GCAGGTGCTG 
TTAGTGGCAC GCGACGGCGG TGTGCAGCCC GCCTCGGCGG GCGGTGGCGC CCGCGGCAAC 
GAGATCGACT ACCGGCAACT CGTCGCGCGC AGCGCGCCCC AGGCCGGCGC CGCGCCGCAT 
GCAGCCGATG CGCCGCTGAT GATCCTGTAC ACCTCGGGCA CCACCGGGCG ACCGAAGGGC 
GTGCTCCACA CCCACGCCGG CTTTCCGCTG AAGGCGGCGC AGGACATGAT GATGGCCTTC 
GACGTGAAGG CCGGCGAGCA TATCGGCTGG ATTACCGACA TGGGCTGGAT GATGGGGCCC 
TGGCTGGTGT TCGGTGCGCT GCTGCGCGGG GCCGCCCTGA TGCTGTTCGA GGGCACGCCC 
GACCACCCGC GGCCCGATCG GCTGTGGCAA CTCGTCGAGC GCCACCGCCT AACCCACCTC 
GGGCTGTCAC CCACGCTCGC CCGTCTGCTG ATGGGCGAGG GCGAGGCGGG GCTGCCGGCA 
GCGGGCGCGC TCGCCAGCCT GCGCGTGTTC GGCTCCACCG GCGAGCCGTG GAACGAGGTG 
CCCTGGCGCT GGCTGTTCGA GCGCGTCGGC GAAGGGCGCC GGCCGATCAT CAACTACTCG 
GGCGGCACCG AGATTGGCGG CGGCATCCTC GCCTGCTTCC CCGGCCTGCC ACAGAAGGCT 
TGCGGCTTTG CCGGGCCGAT CCCGGGCATG GCGGCCGACG TGGTCGACGC CGGCGGGCGC 
AGCCTGCGCG CCGGCCCGGC CACCGAGCGC GGCGCCGGCA CGCAGGTCGG TGAGCTCGTG 
CTGCGCGCGC CGTGGCCGGG CATGGCCGCC GGCTTCTGGC AGGACGACGC ACGCTACCTC 
GACACCTACT GGTCGCGCTT TGCCGGCATC TGGGTGCATG GCGACTGGGC GCGGGTGGAT 
GCCGACGGCC ACTGGTTCAT CGAGGGACGC AGCGACGACA CGCTCAAGAT CGCCGGCAAG 
CGCGTCGGCC CGGCCGAGTA CGAGTCGGCC CTGGTCGGCC ATCCGCTGGT CAGGGAGGCG 
GTCGCGATCG GCGTGCCCGA CCCGGTGAAG GGTGAGGCGG CGGTGTGCTT CGTGACGCTG 
GCAGCCGCGG CCGGGGGTGT GGGCCCCGAG GCGTGGGCGG AGCGCGAGCG CGTGTTGCGC 
GAGCATGTTG CCGAGCGCCT GGGCAAGGCG CTGGCGCCGG TCCGCGTGCA TTGTACGGCG 
GCGCTGCCGC GCACGCGCAA CGGCAAGATC CTGCGCCGCC TGGTGCGTGC CGCCTACCTC 
GCCGGCCCCC TGGGTGACCT CAGCGCGCTG GAGGACCCGG CCGCACTCGA TGCCATCCGT 
GCCTGCGCAG AGCCGGCCGG GGCCCTCTCC TGA 

 

Protein sequence

MSEQLLANGC RWEDTGLARF IRDYGHVDLA GLQACATEEP ERFWAEVAEA LALRWTRPYR 
RVLERSAGPA WPRWFVGGEL DLYDNLIGRV AREDPERLAL SWEGDDGSTR RYRYVELDEE 
ARRLATGLAE LGIGRGDRVA IYLPMVPETA VVLLACARLG AIAMPLFSGY GADAVASRLQ 
DAGAKLLVCA DAYLRRGRRV DMLAEARLAA ARSAAVAQVL LVARDGGVQP ASAGGGARGN 
EIDYRQLVAR SAPQAGAAPH AADAPLMILY TSGTTGRPKG VLHTHAGFPL KAAQDMMMAF 
DVKAGEHIGW ITDMGWMMGP WLVFGALLRG AALMLFEGTP DHPRPDRLWQ LVERHRLTHL 
GLSPTLARLL MGEGEAGLPA AGALASLRVF GSTGEPWNEV PWRWLFERVG EGRRPIINYS 
GGTEIGGGIL ACFPGLPQKA CGFAGPIPGM AADVVDAGGR SLRAGPATER GAGTQVGELV 
LRAPWPGMAA GFWQDDARYL DTYWSRFAGI WVHGDWARVD ADGHWFIEGR SDDTLKIAGK 
RVGPAEYESA LVGHPLVREA VAIGVPDPVK GEAAVCFVTL AAAAGGVGPE AWAERERVLR 
EHVAERLGKA LAPVRVHCTA ALPRTRNGKI LRRLVRAAYL AGPLGDLSAL EDPAALDAIR 
ACAEPAGALS