Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_3285 |
Symbol | |
ID | 7874183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 3600819 |
End bp | 3601568 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643700219 |
Product | ABC transporter related |
Protein accession | YP_002890257 |
Protein GI | 237653943 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCATCG TCCAGATCGA ACACGTGAGC AAGAGTTTTC GTCTCGGCGA GCAGATGGTG CTGGCGCTGG ACGACGTCTC GCTCGAGATC GAGCCAGGGG TGTTCCTGGC GATCGCAGGG CCTTCGGGCA GTGGCAAGTC GACCTTGCTG AACATCATCG GCTGCATCGA CACGCCGAGT TCGGGGCGGG TGGTCGTGGA CGGTCACGAC GTGTCGAACC GTACGCCCGA CGAACTGGCC GACCTGCGTG CCCGTACCAT CGGCTTCATC TTTCAGACCT TTAATCTGCT CCCTGTCCTG TCGGCCGCGG AGAACGTCGA GTATCCCCTG CTGCAGATGC CCGAGCTCAC GAAGAAGGAG CGCGCGGAAC GGGTGCGCCA TTATCTCGGG GTAGTCGGCC TGAAGAAATA CGCCGAGCAT CGGCCGAACC AGCTCTCCGG CGGCCAGCGC CAGCGCGTGG CGATCGCGCG CGCGCTGGCC ACGCACTCCA AGATCGTCCT TGCCGACGAG CCCACCGCCA ACCTCGACAG CAAGACCGGC ACCAGCATCC TCAAGCTGAT GCGCGACATC AACCGCCAGT CGGGGACGAC TTTCGTCTTT TCCACCCACG ACCGCAAGGT CATGAACATG GCCGACCGGC TGGTGCGCAT CGCCGACGGC CAGATCATCG CGCTCGGCAT GAAGGCCGAC GACCGCTGGG TGTTCGTCGA TGGGCGGACG CCGCGCGACG AGGATATCCG CGAAATCTAG
|
Protein sequence | MAIVQIEHVS KSFRLGEQMV LALDDVSLEI EPGVFLAIAG PSGSGKSTLL NIIGCIDTPS SGRVVVDGHD VSNRTPDELA DLRARTIGFI FQTFNLLPVL SAAENVEYPL LQMPELTKKE RAERVRHYLG VVGLKKYAEH RPNQLSGGQR QRVAIARALA THSKIVLADE PTANLDSKTG TSILKLMRDI NRQSGTTFVF STHDRKVMNM ADRLVRIADG QIIALGMKAD DRWVFVDGRT PRDEDIREI
|
| |