Gene Tmz1t_3285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_3285 
Symbol 
ID7874183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp3600819 
End bp3601568 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content64% 
IMG OID643700219 
ProductABC transporter related 
Protein accessionYP_002890257 
Protein GI237653943 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATCG TCCAGATCGA ACACGTGAGC AAGAGTTTTC GTCTCGGCGA GCAGATGGTG 
CTGGCGCTGG ACGACGTCTC GCTCGAGATC GAGCCAGGGG TGTTCCTGGC GATCGCAGGG
CCTTCGGGCA GTGGCAAGTC GACCTTGCTG AACATCATCG GCTGCATCGA CACGCCGAGT
TCGGGGCGGG TGGTCGTGGA CGGTCACGAC GTGTCGAACC GTACGCCCGA CGAACTGGCC
GACCTGCGTG CCCGTACCAT CGGCTTCATC TTTCAGACCT TTAATCTGCT CCCTGTCCTG
TCGGCCGCGG AGAACGTCGA GTATCCCCTG CTGCAGATGC CCGAGCTCAC GAAGAAGGAG
CGCGCGGAAC GGGTGCGCCA TTATCTCGGG GTAGTCGGCC TGAAGAAATA CGCCGAGCAT
CGGCCGAACC AGCTCTCCGG CGGCCAGCGC CAGCGCGTGG CGATCGCGCG CGCGCTGGCC
ACGCACTCCA AGATCGTCCT TGCCGACGAG CCCACCGCCA ACCTCGACAG CAAGACCGGC
ACCAGCATCC TCAAGCTGAT GCGCGACATC AACCGCCAGT CGGGGACGAC TTTCGTCTTT
TCCACCCACG ACCGCAAGGT CATGAACATG GCCGACCGGC TGGTGCGCAT CGCCGACGGC
CAGATCATCG CGCTCGGCAT GAAGGCCGAC GACCGCTGGG TGTTCGTCGA TGGGCGGACG
CCGCGCGACG AGGATATCCG CGAAATCTAG
 
Protein sequence
MAIVQIEHVS KSFRLGEQMV LALDDVSLEI EPGVFLAIAG PSGSGKSTLL NIIGCIDTPS 
SGRVVVDGHD VSNRTPDELA DLRARTIGFI FQTFNLLPVL SAAENVEYPL LQMPELTKKE
RAERVRHYLG VVGLKKYAEH RPNQLSGGQR QRVAIARALA THSKIVLADE PTANLDSKTG
TSILKLMRDI NRQSGTTFVF STHDRKVMNM ADRLVRIADG QIIALGMKAD DRWVFVDGRT
PRDEDIREI