| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3166 |
|---|
| Symbol | |
|---|
| ID | 7874307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 3435769 |
|---|
| End bp | 3440727 |
|---|
| Gene Length | 4959 bp |
|---|
| Protein Length | 1652 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643700095 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002890139 |
|---|
| Protein GI | 237653825 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA CGCCTCGGCA GCTTCTGCAC AACCTTTTGG ATTACATACG AGAGCAGGCC
AAGAACGTCG ATCCGAAAGG GTTTCGGCTT TCAGCTGCCA AGGGCTTCCT TCGTCGTCGG
CCCGAACTCG CAGGCCTCCC GGGCGTCACC TTCGACCTCA AGGTCGAAGG TGACCACACG
TGGCTCCAGG TTGAACGATT GGATGCACGC AGACCACCAG CGCCTCCTGA GCATGCAAGT
GACCTGCTTG TAGTTGGCGC CGACCCGTTC GGTGCCCCGC CAGTCGTGAG CGAGGCAGGC
ATCAAGTCGC GCATCACCAG GCTTCGAGAA CGGAGACCGG ACGATACCTT TGAGGCCGCA
GCCGCCGAGA TACGCGCCAC CGCAGACGCA ACCCTGAAAG CATACTCGCC TATCTGGCAG
GCCTGGGCTG AGGGCGAACG GCCTCGTAGG AAGACGATTG CGCTGTACGC TGAACTGTTC
GCCCTGAAGC ACCAGCTCGA GGCGGAAGAG ACTGCTCGGC CTCAAGAGCT CGTGTGGGGC
ATCGGCGTCG CCAGTTGGAA CATCCCGGTC GACTCGGACA GGATCGCGTT CGAATATCCG
CTAATCACTC AGGCGCTCGA AATCTCCATC GACGAACGCA CCATGATGCT TGAGGTGCGC
CCTCGCTCTA CCGATACTCG CGTCGAGTTG GACGGTTTCA CTGCTTGCGC CGTCATCGGA
GCGGCCGAAC TCGAGCTCGC GGCAAAAGAA CACCTGAAGC GGCCTGGCGC CGCGCCAGTG
ACGCCTTTTG ATGCATCGAC CTACGGTGAC ATCCTCCGGC TCGTCGCCAG CAACATGGAC
AGTGGTGGGC AATATCGGGA AGTGCAGGGA AAGGCTGAGC CCGTCCCACC CCCTGGCTCG
AACCTCATCG TCACAGACGA GTGGGTCCTT CTCTCACGCC CCCGGTCCAA CAATTACCTG
TTTGACGACC TCCGACGCCT TCAGGAAAAG CTCGAGGCCG GCGTAGAGAT CCCTTCGGGC
CCACTGTCCC TCGTTTCTCC CCCTTCAGAT GAGCCGGTCC GCCATTCAGA GATTCGCTTC
CGCGGACTAT CGACCCGCGG CTCGGGGAGT GGTGGGGGTG CTGCAAGTAC GCAAGAACTG
TACTTCCCGC TGCCCTACAA CGACGAGCAA GTCACCATCA TCCAACAGCT CGAGCAGTCC
CCCGGTGTGA CCGTCCAGGG ACCGCCGGGC ACGGGCAAGA CTCACACAAT CGCCAACATC
ATCTGCCACT ACCTCGCGAG CGGGAAACGC GTGCTGGTGA CCTCGCGCGG AGAGCAAGCA
CTTGAGGTGC TGCAGTCGAA GATTCCCGAG GGTGTGCGCA AGCTCACGGT CTCGCTGCTC
GCAAGCGACC GAGAGGGTGT GCGGCAATTC CAGGCATCCA TCGAGGCGAT ACAACACCAG
ATTTCACAGC TGAACCCGGC ACTCACCCAA CGCGAGATTT CCGAGCGCCA AAGTGCCATT
GACCGCGCAC ACGAGGAACT CGCGCTAATA GACCGGCGCG TAGACGAGAT AGCTGCCACG
CAGTTGCAAG AGATCGAGGT GGACGGCGTC CCGCAGCGCG CAGCGAAGAT GGCCGAATTG
GTCCTCTCCG GCCATGAACA TTTCGGCTGG TTCGACGATG TCATCGACCT GGACGCCAAA
CATGCTCCCC CTCTGACGCA GGAAGAGGCA AGCCAGCTGA GAGAGTCCCG AAGGATCCTG
CGCGACGACC TGTGCTATGT GGGCGTTCAG CTACCTGCCA CGGACGCCCT GCCCAGCGTG
GCCGACATCG CTCGACTGCA CGAGATTCTT GTCAGAATGC GCCGGCTCGA ATCTCGTATC
AGAAGTGGCG GGCTTCTTCC TCTCAAGGCA AGTAGCCCCG AAGTACTGCA GGCCGCTCAA
GACTTGCTCG CACGAATCGA CGCTACGCTC GAAGTCGTCA CTGGTCTGGA AGGTCTCGGT
GACGCTTGGC CCTTCGCGCT CCGTGAAAAG TGCCGACATG CCAACTTCAA GGCTGAACGC
GAGGCCTTGG AGTCGTTGTT CAATGACATC GACACTTTGA TTGAAGCACG CGCAGGTTTC
TTGAAACGCC CAGTCGATTT CCCTGAGCGC GGACTCACCT GCCAGAAGAC GAAGGAAGCC
GTTAAGCGCG CCGCCGAGAC GGGCAAGCCT TTTGGCTTTA TCGCATTCGG GGCGAGCGAT
GCCAAAGAAA ATGTGGGGCA GATTCGGGTT TCGGGCCTTG TCCCACAGTC GACGGCCGAT
TGGCAACATG TAGACCGGTA TTTACAGCTG CACCAGGAAA TCCTGTCGTT CCAGGTTCGC
TGGAATAACT TTGCGGATGA CCTCTCGCTA CCACGGCTCG AGGGCGGCGT TGCCAGCCTC
CGAAGGATCG AGTTGATCGC GAGCGCCGCG AAGAACGCGC ACAAACTGGC GACGGAGCAT
GACGCCCAAC TGGTGGCGAA GGCGCAGGAG GTCTTCCAGC GCGCCCCGCT CAAGGCGCTC
ACCAGCGATT CAACCGAGCT GCGCTCGGTC CGTGAGCAAC TTGACGACCA CCTGACAAAT
GCGACGCTGG CTCAGGCGAC TGTCCAACTC GCAACCCTGC AAGAAAAGCT CGTGGGCACG
TCAGGGCCGG TTATCGACAC GCTCAGATCG TTTGTCCTTC GCGAGTTGGG CAAGGTCGAC
CTCGAACCAG AGCGCGTTGC GGCAAGGTAT GCGGAGTTGC TGGCAGAGCT TCGTCGCCTC
GCGGAGCTCG GCACCCATTT GTGCCGAGTG AACGACTACG CTAGCCGCAT TGAACGAGCG
GGTGGCGTGA AGCTCGCGCA GCGAATCCGG ACCGAGGCTG TCGGCATGGC TGGGGAAGAC
CCAGTCTTTC CTCCGACATG GCGAGAAGCC TGGAACTGGG CACGGGTACG GGCCCACCTG
CAGTCGATTG AAGCACGCGA GGAACTCGTC AGACTGTTCG CACGACGCAA AGACCTGGAA
AACGGGCTGG CGCGCCTGTA TCAGGAGCTC GTTGCAAAAT CGGCGTGGCT CTCAACCAAG
CGTAACGCAA CGCAACGAGT CCTCCAGGCG CTGGCGGGCT ACGCTTCCGC CATTCGCCGC
ATCGGCCAGG GGACCGGCCC GAATGCCACC CGTTATCGAC GGGACGCGCG CGAGGCGATG
TTTGAAGCCG CTGGCGCAGT TCCGTGCTGG ATCATGAGTC ACGCCCGAAT CTCCGAGGCG
ATGCCGGCCG ATATTGGCGC TTTCGACCTC GTCATTGTCG ACGAGGCAAG TCAGTCCGAC
CTGTGGGCGC TGCCGGCGAT TCTGCGCGGA AGGAAGATTC TCGTGGTCGG CGACGACAAG
CAGGTCTCGC CGGATGGCGG GTTCATTGCG AGTGCCACAA TTAACAATCT GAAGGCGCGC
TTCCTGTCGG ACCAGCCGTA CGGCAACGAC ATGACGCCGG AGAAGTCCCT GTACGACCTG
GCGGCACGAG TGTTCGCGGC GAACCAGGTA ATGCTCAGAG AGCATTTCCG TTGTGTCCCG
GCCATCATCG CCTACTCGAA CCGTACCTTC TACAAGGACA ACATCCAGCC ACTACGCATT
CCGAGCGCTC ATGAGCGCAT CGACCCTCCC TTGGTGGACC TTTACGTCCC ACATGGCATG
CGAGATAAGC ACAGCTGCAA CAAGGCGGAG GCTGAAGCAA TTGCCGAGGA GATTGCTGCC
ATTCTCGACA ACCCAAGCCT CGTAGGTCGC ACGATTGGCG TTGTCTCTCT GCTCGGCATG
GAGCAGGCAA AGCTCATTGA TAGCGTCGTA CGTCAGAGGT GCGACGCGGC CGAACTCCTG
CGCCGCCGGT TTGACTGCGG CGACGCACGG ACCTTCCAAG GGAGCGAGCG CGACATCATG
TTCCTTTCCA TGGTGGTCGA CAGCAAGAGC TGCAAGGCAC TTTCCGGCAC CATGTACGAC
CAGCGCTTTA ACGTTGCCGC GAGCCGCGCC CGCGACCGCA TGTACCTTGT CCGTTCGCTC
AAAGTCTCGG ACCTGTCAGA CAAGGACCTG CGTCTCACCC TCGTAAGCCA TTTTGACAAA
CCGCTCATTG CCGATGAGCA ACCGGCAGAA CTCCTCATTG ACCTGTGCGA GTCGGGATTC
GAGCGCGAGG TCTTTACGAG GCTCTCGGAG CACGGCTATC GGGTCATTCC CCAGGTCAAG
GCGGGCGCAT ACCGTATTGA TATGGTCGTC GAAGGTGCGG GAGACGCCCG CCTCGCCATT
GAGCTCGATG GCGACGACTA CCACGGACCG GACCGGTGGG CCAACGACAT GGCCCGCCAA
CGCGTTCTTG AACGCGCAGG CTGGGTCTTC TGGCGGTGTT TTGCGTCGAC CTGGTCACTG
CAAAAGGACG AAGTCTTCGC AGAGCTCCTC TCAAGGCTCC AGGCGATGGG TATCGAGCCG
ATTGGGGCGA TGGAAAGAGT ACCCTCGCTG GTCGAAAAGC GAACCTGGAC ACGTTCAGAC
GGGGAGCGCT ACGGGGCCGA CGATCCCGCC GCTTACGTCC TGGAGGACGC AATCGCTCAA
GCGAACCGCG AGAACGCCGC GGCGGCATCT CCGACGGAAA CCGATGCGCC TCGTTCACCC
GAGCCGGCGC ACAGCGATGC CCTACCGACA ACTACCGAGA GCGACATCGC CTACCTGATC
ACCGTACAGC AGTACGAGGG CGGACCGTGG TGGACGCGAG CATTCCCTGC GCACCACACC
CTTGTTGCTC TTCGTCAGGC AAATGGAGGT CGGCGCGCCT CATCAACCCA GGACGCCGCC
GCCGCTGTCA GTGCTCACGT AGATGCAGTC CTCGACGAGT TGCTGGAGAA GAAAATCGCT
CCGGCCGCCG AAGCCGCTCA CCCTAAACGT GAGGAGGCGA TTCGCATTGC GACAGAAACA
GTGAAGGCGT CAGGGTGGAA GGCCGTCCTG GTCGACTGA
|
|---|
| Protein sequence | MKNTPRQLLH NLLDYIREQA KNVDPKGFRL SAAKGFLRRR PELAGLPGVT FDLKVEGDHT
WLQVERLDAR RPPAPPEHAS DLLVVGADPF GAPPVVSEAG IKSRITRLRE RRPDDTFEAA
AAEIRATADA TLKAYSPIWQ AWAEGERPRR KTIALYAELF ALKHQLEAEE TARPQELVWG
IGVASWNIPV DSDRIAFEYP LITQALEISI DERTMMLEVR PRSTDTRVEL DGFTACAVIG
AAELELAAKE HLKRPGAAPV TPFDASTYGD ILRLVASNMD SGGQYREVQG KAEPVPPPGS
NLIVTDEWVL LSRPRSNNYL FDDLRRLQEK LEAGVEIPSG PLSLVSPPSD EPVRHSEIRF
RGLSTRGSGS GGGAASTQEL YFPLPYNDEQ VTIIQQLEQS PGVTVQGPPG TGKTHTIANI
ICHYLASGKR VLVTSRGEQA LEVLQSKIPE GVRKLTVSLL ASDREGVRQF QASIEAIQHQ
ISQLNPALTQ REISERQSAI DRAHEELALI DRRVDEIAAT QLQEIEVDGV PQRAAKMAEL
VLSGHEHFGW FDDVIDLDAK HAPPLTQEEA SQLRESRRIL RDDLCYVGVQ LPATDALPSV
ADIARLHEIL VRMRRLESRI RSGGLLPLKA SSPEVLQAAQ DLLARIDATL EVVTGLEGLG
DAWPFALREK CRHANFKAER EALESLFNDI DTLIEARAGF LKRPVDFPER GLTCQKTKEA
VKRAAETGKP FGFIAFGASD AKENVGQIRV SGLVPQSTAD WQHVDRYLQL HQEILSFQVR
WNNFADDLSL PRLEGGVASL RRIELIASAA KNAHKLATEH DAQLVAKAQE VFQRAPLKAL
TSDSTELRSV REQLDDHLTN ATLAQATVQL ATLQEKLVGT SGPVIDTLRS FVLRELGKVD
LEPERVAARY AELLAELRRL AELGTHLCRV NDYASRIERA GGVKLAQRIR TEAVGMAGED
PVFPPTWREA WNWARVRAHL QSIEAREELV RLFARRKDLE NGLARLYQEL VAKSAWLSTK
RNATQRVLQA LAGYASAIRR IGQGTGPNAT RYRRDAREAM FEAAGAVPCW IMSHARISEA
MPADIGAFDL VIVDEASQSD LWALPAILRG RKILVVGDDK QVSPDGGFIA SATINNLKAR
FLSDQPYGND MTPEKSLYDL AARVFAANQV MLREHFRCVP AIIAYSNRTF YKDNIQPLRI
PSAHERIDPP LVDLYVPHGM RDKHSCNKAE AEAIAEEIAA ILDNPSLVGR TIGVVSLLGM
EQAKLIDSVV RQRCDAAELL RRRFDCGDAR TFQGSERDIM FLSMVVDSKS CKALSGTMYD
QRFNVAASRA RDRMYLVRSL KVSDLSDKDL RLTLVSHFDK PLIADEQPAE LLIDLCESGF
EREVFTRLSE HGYRVIPQVK AGAYRIDMVV EGAGDARLAI ELDGDDYHGP DRWANDMARQ
RVLERAGWVF WRCFASTWSL QKDEVFAELL SRLQAMGIEP IGAMERVPSL VEKRTWTRSD
GERYGADDPA AYVLEDAIAQ ANRENAAAAS PTETDAPRSP EPAHSDALPT TTESDIAYLI
TVQQYEGGPW WTRAFPAHHT LVALRQANGG RRASSTQDAA AAVSAHVDAV LDELLEKKIA
PAAEAAHPKR EEAIRIATET VKASGWKAVL VD
|
|---|
| |