| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_3143 |
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| Symbol | |
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| ID | 7874285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 3399892 |
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| End bp | 3401736 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643700073 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002890117 |
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| Protein GI | 237653803 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.212991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACGC CCAGCAATCC CTCCGAGATC GCCCGCGAAA CCCTGCGCCA GCTCGCGCTG
CGCCGGATTG CCCCCACGCC GGACAACTAC CGCAAGCTCT ATCACGAGAT CGCCGGCACC
CGGCCCGACG ACGACGCCCT GCCCGAAGCC TTCGTGCGCA AACTCGCCCG CCGCCTGCCG
CGCGACAGCG CCGAGCGCCA GCGCCACGGC CACCAGCTCG ACCAAGCGCT CGCCGACGGT
CGCGACAAGG CCGCCGAGGC CGCACTCGAG CGCTACCTCG ACAGCCTCAA GCTGGGCGAA
CCGCAGGCCT GGAACGAGCT CATCGGCAAC CTGCTGCGCC AGTGGGAGGC GCGTCAGACC
GGCTGGACCC CGGCGCGCAA GCGCGAGGCC CTCGACCGCG TGCTGGGCGC AGCCGACCCG
GCGGCGCTGT ACACCCGCCT GCAGGGCCTG CTCAAGAGCT GGACGCAGGC CATGACCGAT
GCCGATGCGC TCGCCGTCGA GGTGCCCGAC GCGGCAGACG AACCCGACGC CAGCGCTTCG
CCCCGTGCCG ACGCAAGCAC CGCAAGGCCC GCCACGCCCG CGCGCACCGC CGCTGCCGCG
CACCCCCCTG CCTCCACTCC AGGCGTCGAC TCCGCCACCA TCGACGCCCT GCGCGAGCTC
GTCACCATCA GCCTGGGCGA GGCCCTGCCG CCGCTGCTGG AGGAACAACC GCCGCTGCGC
GAGACCGCCG CCACGCTGTG CGCCGAAGCT GCCAGTCGCA GCGAGGCCGC TGGCCTGCGC
GAGGTCGGCA CGCGCCTGCG CGCCTTCGCA CACGAGCTCG AGCTGGCCGC CGCCGACGAG
GCCGAAATCC GCGCCGGCAT GCTCGAGCTG CTGCGCATGC TGCTTCGCAA CATCGACGAG
CTGGTGCTCG ACGATCGCTG GCTCGCCGGC CAGATCGAGA TGCTGCGCGA GATCGTCGAC
AGCCGTCCCG ACCCGCGCAA GATCGACGAC GCCGGCCGCC GCCTCAAGGA ACTCATCCAC
AAGCAGGGCC AGCTCAAGCA CACCCTGGCC CAGTCCCAGC GCCACCTGCG CGACATGCTC
GCCGGCTTCG TCGACCAGCT CGCGCGCTTC TCCGAATCGA CCGGCGCCTA CCACGACCGC
ATCGGCCAGT GCGCCCAGCG TATCGCCCAG GCCAACGACA TCACCGAGAT CGGCCCCCTG
CTCGACGAGG TCATGACCGA GACTCGCAGC ATCCAGGACG AGGCACGCCG CTCGCGCGAC
GAGCTCATCG TCGCCCGCGG CGAGGCCACG GCGGCGCAGG AGCGCGTCGT CACGCTGCAG
AACGAGCTCG AGGAAGCCAG CCGCCTGATG CGCCACGACC AGCTCACCGG CGCGCTCAAC
CGCCGTGGCC TCGACGAGAT GTTCCAGACC GAATCCGCGC GCGCCCAGCG TCGCGGCACG
CGGCTCGCCG TCGCGCTGCT CGACATCGAC CACTTCAAGA AGCTCAACGA CAGCCTCGGC
CACAAAGGTG GCGACGACGC CCTGGTACAC CTCGCCAAGG TCGTGCGCCA GCACCTGCGC
CCCCAGGACG TGCTCGCCCG CTATGGTGGC GAGGAGTTCG TCATCCTGCT GCCCGAGACC
GGCGACACCG ACGCCCAACA GGCGCTCGTG CGCCTGCAGC GCGAGCTCAC CCGCGAATTC
TTCATGGCCG AAATGCAGAA GATCGTGATC ACCTTCAGCG CCGGCGTCAC CCGCCTGGCC
GAGGGCGAAA GCCTGGAGAG CGCGCTGAAG CGCGCCGACG GCGCGATGTA TCAAGCCAAG
CAGGCCGGCC GCAACCGCGT GATGGTCGCG CCGCTACACG ACTGA
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| Protein sequence | MSTPSNPSEI ARETLRQLAL RRIAPTPDNY RKLYHEIAGT RPDDDALPEA FVRKLARRLP
RDSAERQRHG HQLDQALADG RDKAAEAALE RYLDSLKLGE PQAWNELIGN LLRQWEARQT
GWTPARKREA LDRVLGAADP AALYTRLQGL LKSWTQAMTD ADALAVEVPD AADEPDASAS
PRADASTARP ATPARTAAAA HPPASTPGVD SATIDALREL VTISLGEALP PLLEEQPPLR
ETAATLCAEA ASRSEAAGLR EVGTRLRAFA HELELAAADE AEIRAGMLEL LRMLLRNIDE
LVLDDRWLAG QIEMLREIVD SRPDPRKIDD AGRRLKELIH KQGQLKHTLA QSQRHLRDML
AGFVDQLARF SESTGAYHDR IGQCAQRIAQ ANDITEIGPL LDEVMTETRS IQDEARRSRD
ELIVARGEAT AAQERVVTLQ NELEEASRLM RHDQLTGALN RRGLDEMFQT ESARAQRRGT
RLAVALLDID HFKKLNDSLG HKGGDDALVH LAKVVRQHLR PQDVLARYGG EEFVILLPET
GDTDAQQALV RLQRELTREF FMAEMQKIVI TFSAGVTRLA EGESLESALK RADGAMYQAK
QAGRNRVMVA PLHD
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